Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.81■□□□□ 0.44
HCFC1R1Q9NWW0 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
HCFC1R1Q9NWW0 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HCFC1R1Q9NWW0 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
HCFC1R1Q9NWW0 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HCFC1R1Q9NWW0 AL035633.1-201ENST00000406139 838 ntBASIC17.81■□□□□ 0.44
HCFC1R1Q9NWW0 HMGA1P7-201ENST00000406908 502 ntBASIC17.81■□□□□ 0.44
HCFC1R1Q9NWW0 FAM58DP-201ENST00000428076 619 ntBASIC17.81■□□□□ 0.44
HCFC1R1Q9NWW0 FAM86GP-201ENST00000448322 971 ntBASIC17.81■□□□□ 0.44
HCFC1R1Q9NWW0 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.81■□□□□ 0.44
HCFC1R1Q9NWW0 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.81■□□□□ 0.44
HCFC1R1Q9NWW0 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HCFC1R1Q9NWW0 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.81■□□□□ 0.44
HCFC1R1Q9NWW0 FAM86C2P-203ENST00000528684 1004 ntBASIC17.81■□□□□ 0.44
HCFC1R1Q9NWW0 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HCFC1R1Q9NWW0 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HCFC1R1Q9NWW0 DUX4L17-201ENST00000557360 1267 ntBASIC17.81■□□□□ 0.44
HCFC1R1Q9NWW0 AL135744.1-201ENST00000565098 629 ntBASIC17.81■□□□□ 0.44
HCFC1R1Q9NWW0 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HCFC1R1Q9NWW0 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.81■□□□□ 0.44
HCFC1R1Q9NWW0 AL390955.2-201ENST00000603032 514 ntBASIC17.81■□□□□ 0.44
HCFC1R1Q9NWW0 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.81■□□□□ 0.44
HCFC1R1Q9NWW0 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.81■□□□□ 0.44
HCFC1R1Q9NWW0 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.81■□□□□ 0.44
HCFC1R1Q9NWW0 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HCFC1R1Q9NWW0 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.81■□□□□ 0.44
HCFC1R1Q9NWW0 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.81■□□□□ 0.44
HCFC1R1Q9NWW0 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HCFC1R1Q9NWW0 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.81■□□□□ 0.44
HCFC1R1Q9NWW0 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HCFC1R1Q9NWW0 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HCFC1R1Q9NWW0 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HCFC1R1Q9NWW0 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
HCFC1R1Q9NWW0 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.81■□□□□ 0.44
HCFC1R1Q9NWW0 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
HCFC1R1Q9NWW0 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.81■□□□□ 0.44
HCFC1R1Q9NWW0 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HCFC1R1Q9NWW0 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
HCFC1R1Q9NWW0 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.81■□□□□ 0.44
HCFC1R1Q9NWW0 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HCFC1R1Q9NWW0 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.8■□□□□ 0.44
HCFC1R1Q9NWW0 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HCFC1R1Q9NWW0 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
HCFC1R1Q9NWW0 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
HCFC1R1Q9NWW0 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HCFC1R1Q9NWW0 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HCFC1R1Q9NWW0 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HCFC1R1Q9NWW0 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HCFC1R1Q9NWW0 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
HCFC1R1Q9NWW0 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HCFC1R1Q9NWW0 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.8■□□□□ 0.44
HCFC1R1Q9NWW0 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HCFC1R1Q9NWW0 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HCFC1R1Q9NWW0 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HCFC1R1Q9NWW0 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HCFC1R1Q9NWW0 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HCFC1R1Q9NWW0 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.8■□□□□ 0.44
HCFC1R1Q9NWW0 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.8■□□□□ 0.44
HCFC1R1Q9NWW0 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HCFC1R1Q9NWW0 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.8■□□□□ 0.44
HCFC1R1Q9NWW0 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HCFC1R1Q9NWW0 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
HCFC1R1Q9NWW0 DUX4L27-201ENST00000554796 1261 ntBASIC17.8■□□□□ 0.44
HCFC1R1Q9NWW0 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.8■□□□□ 0.44
HCFC1R1Q9NWW0 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.8■□□□□ 0.44
HCFC1R1Q9NWW0 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC17.8■□□□□ 0.44
HCFC1R1Q9NWW0 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.8■□□□□ 0.44
HCFC1R1Q9NWW0 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC17.8■□□□□ 0.44
HCFC1R1Q9NWW0 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HCFC1R1Q9NWW0 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
HCFC1R1Q9NWW0 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HCFC1R1Q9NWW0 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HCFC1R1Q9NWW0 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HCFC1R1Q9NWW0 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.8■□□□□ 0.44
HCFC1R1Q9NWW0 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.8■□□□□ 0.44
HCFC1R1Q9NWW0 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HCFC1R1Q9NWW0 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.79■□□□□ 0.44
HCFC1R1Q9NWW0 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
HCFC1R1Q9NWW0 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
HCFC1R1Q9NWW0 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HCFC1R1Q9NWW0 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
HCFC1R1Q9NWW0 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.79■□□□□ 0.44
HCFC1R1Q9NWW0 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HCFC1R1Q9NWW0 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HCFC1R1Q9NWW0 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HCFC1R1Q9NWW0 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HCFC1R1Q9NWW0 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HCFC1R1Q9NWW0 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HCFC1R1Q9NWW0 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.79■□□□□ 0.44
HCFC1R1Q9NWW0 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HCFC1R1Q9NWW0 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.79■□□□□ 0.44
HCFC1R1Q9NWW0 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.79■□□□□ 0.44
HCFC1R1Q9NWW0 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.79■□□□□ 0.44
HCFC1R1Q9NWW0 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.79■□□□□ 0.44
HCFC1R1Q9NWW0 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.79■□□□□ 0.44
HCFC1R1Q9NWW0 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.79■□□□□ 0.44
HCFC1R1Q9NWW0 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
HCFC1R1Q9NWW0 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HCFC1R1Q9NWW0 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HCFC1R1Q9NWW0 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms