Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NEUROD4Q9HD90 TP73-AS1-210ENST00000637775 1455 ntBASIC16.34■□□□□ 0.21
NEUROD4Q9HD90 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NEUROD4Q9HD90 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NEUROD4Q9HD90 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NEUROD4Q9HD90 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NEUROD4Q9HD90 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.34■□□□□ 0.21
NEUROD4Q9HD90 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
NEUROD4Q9HD90 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NEUROD4Q9HD90 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
NEUROD4Q9HD90 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NEUROD4Q9HD90 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NEUROD4Q9HD90 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
NEUROD4Q9HD90 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.33■□□□□ 0.21
NEUROD4Q9HD90 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.33■□□□□ 0.21
NEUROD4Q9HD90 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
NEUROD4Q9HD90 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NEUROD4Q9HD90 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
NEUROD4Q9HD90 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NEUROD4Q9HD90 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NEUROD4Q9HD90 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
NEUROD4Q9HD90 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
NEUROD4Q9HD90 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NEUROD4Q9HD90 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NEUROD4Q9HD90 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.33■□□□□ 0.2
NEUROD4Q9HD90 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NEUROD4Q9HD90 AC091607.1-201ENST00000490318 1060 ntBASIC16.33■□□□□ 0.2
NEUROD4Q9HD90 AC124947.2-201ENST00000547118 1133 ntBASIC16.33■□□□□ 0.2
NEUROD4Q9HD90 TPSP2-201ENST00000561760 610 ntBASIC16.33■□□□□ 0.2
NEUROD4Q9HD90 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.33■□□□□ 0.2
NEUROD4Q9HD90 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
NEUROD4Q9HD90 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.33■□□□□ 0.2
NEUROD4Q9HD90 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.33■□□□□ 0.2
NEUROD4Q9HD90 AD001527.2-201ENST00000622994 785 ntBASIC16.33■□□□□ 0.2
NEUROD4Q9HD90 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
NEUROD4Q9HD90 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
NEUROD4Q9HD90 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NEUROD4Q9HD90 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NEUROD4Q9HD90 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NEUROD4Q9HD90 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NEUROD4Q9HD90 EGFEM1P-202ENST00000431685 1563 ntBASIC16.33■□□□□ 0.2
NEUROD4Q9HD90 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
NEUROD4Q9HD90 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
NEUROD4Q9HD90 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NEUROD4Q9HD90 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
NEUROD4Q9HD90 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
NEUROD4Q9HD90 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
NEUROD4Q9HD90 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NEUROD4Q9HD90 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
NEUROD4Q9HD90 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NEUROD4Q9HD90 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NEUROD4Q9HD90 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.32■□□□□ 0.2
NEUROD4Q9HD90 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NEUROD4Q9HD90 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.32■□□□□ 0.2
NEUROD4Q9HD90 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
NEUROD4Q9HD90 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NEUROD4Q9HD90 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NEUROD4Q9HD90 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NEUROD4Q9HD90 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
NEUROD4Q9HD90 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NEUROD4Q9HD90 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.32■□□□□ 0.2
NEUROD4Q9HD90 MINOS1P3-201ENST00000457048 203 ntBASIC16.32■□□□□ 0.2
NEUROD4Q9HD90 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
NEUROD4Q9HD90 TOB2P1-201ENST00000469761 992 ntBASIC16.32■□□□□ 0.2
NEUROD4Q9HD90 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NEUROD4Q9HD90 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.32■□□□□ 0.2
NEUROD4Q9HD90 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
NEUROD4Q9HD90 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.32■□□□□ 0.2
NEUROD4Q9HD90 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.32■□□□□ 0.2
NEUROD4Q9HD90 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.32■□□□□ 0.2
NEUROD4Q9HD90 AP002414.4-201ENST00000589764 1148 ntBASIC16.32■□□□□ 0.2
NEUROD4Q9HD90 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.32■□□□□ 0.2
NEUROD4Q9HD90 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NEUROD4Q9HD90 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NEUROD4Q9HD90 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.32■□□□□ 0.2
NEUROD4Q9HD90 NKILA-202ENST00000614771 2598 ntBASIC16.32■□□□□ 0.2
NEUROD4Q9HD90 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
NEUROD4Q9HD90 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
NEUROD4Q9HD90 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NEUROD4Q9HD90 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NEUROD4Q9HD90 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NEUROD4Q9HD90 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.32■□□□□ 0.2
NEUROD4Q9HD90 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NEUROD4Q9HD90 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
NEUROD4Q9HD90 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
NEUROD4Q9HD90 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NEUROD4Q9HD90 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
NEUROD4Q9HD90 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.31■□□□□ 0.2
NEUROD4Q9HD90 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NEUROD4Q9HD90 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NEUROD4Q9HD90 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NEUROD4Q9HD90 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NEUROD4Q9HD90 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
NEUROD4Q9HD90 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.31■□□□□ 0.2
NEUROD4Q9HD90 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NEUROD4Q9HD90 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NEUROD4Q9HD90 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NEUROD4Q9HD90 KRT17P6-201ENST00000453795 1220 ntBASIC16.31■□□□□ 0.2
NEUROD4Q9HD90 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.31■□□□□ 0.2
NEUROD4Q9HD90 AC096582.2-201ENST00000510860 516 ntBASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms