Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 RN7SL606P-201ENST00000472779 293 ntBASIC16■□□□□ 0.15
POLR2J3Q9H1A7 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16■□□□□ 0.15
POLR2J3Q9H1A7 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16■□□□□ 0.15
POLR2J3Q9H1A7 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
POLR2J3Q9H1A7 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16■□□□□ 0.15
POLR2J3Q9H1A7 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16■□□□□ 0.15
POLR2J3Q9H1A7 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16■□□□□ 0.15
POLR2J3Q9H1A7 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16■□□□□ 0.15
POLR2J3Q9H1A7 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
POLR2J3Q9H1A7 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16■□□□□ 0.15
POLR2J3Q9H1A7 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
POLR2J3Q9H1A7 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
POLR2J3Q9H1A7 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
POLR2J3Q9H1A7 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16■□□□□ 0.15
POLR2J3Q9H1A7 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
POLR2J3Q9H1A7 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
POLR2J3Q9H1A7 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
POLR2J3Q9H1A7 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16■□□□□ 0.15
POLR2J3Q9H1A7 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
POLR2J3Q9H1A7 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16■□□□□ 0.15
POLR2J3Q9H1A7 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
POLR2J3Q9H1A7 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
POLR2J3Q9H1A7 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
POLR2J3Q9H1A7 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
POLR2J3Q9H1A7 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
POLR2J3Q9H1A7 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
POLR2J3Q9H1A7 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.99■□□□□ 0.15
POLR2J3Q9H1A7 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
POLR2J3Q9H1A7 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
POLR2J3Q9H1A7 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
POLR2J3Q9H1A7 AC046185.3-201ENST00000623228 1824 ntBASIC15.99■□□□□ 0.15
POLR2J3Q9H1A7 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
POLR2J3Q9H1A7 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
POLR2J3Q9H1A7 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
POLR2J3Q9H1A7 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
POLR2J3Q9H1A7 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
POLR2J3Q9H1A7 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
POLR2J3Q9H1A7 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC15.99■□□□□ 0.15
POLR2J3Q9H1A7 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
POLR2J3Q9H1A7 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
POLR2J3Q9H1A7 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
POLR2J3Q9H1A7 FAM220CP-201ENST00000395253 831 ntBASIC15.99■□□□□ 0.15
POLR2J3Q9H1A7 DAP-202ENST00000432074 1048 ntTSL 2 BASIC15.99■□□□□ 0.15
POLR2J3Q9H1A7 AC246785.2-201ENST00000432512 513 ntBASIC15.99■□□□□ 0.15
POLR2J3Q9H1A7 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
POLR2J3Q9H1A7 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.99■□□□□ 0.15
POLR2J3Q9H1A7 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC15.99■□□□□ 0.15
POLR2J3Q9H1A7 AL671277.2-201ENST00000458060 996 ntBASIC15.99■□□□□ 0.15
POLR2J3Q9H1A7 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC15.99■□□□□ 0.15
POLR2J3Q9H1A7 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
POLR2J3Q9H1A7 AC124947.2-201ENST00000547118 1133 ntBASIC15.99■□□□□ 0.15
POLR2J3Q9H1A7 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
POLR2J3Q9H1A7 AC109462.3-201ENST00000573934 613 ntBASIC15.99■□□□□ 0.15
POLR2J3Q9H1A7 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.99■□□□□ 0.15
POLR2J3Q9H1A7 AL138831.2-201ENST00000606564 490 ntBASIC15.99■□□□□ 0.15
POLR2J3Q9H1A7 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.99■□□□□ 0.15
POLR2J3Q9H1A7 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
POLR2J3Q9H1A7 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
POLR2J3Q9H1A7 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
POLR2J3Q9H1A7 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
POLR2J3Q9H1A7 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
POLR2J3Q9H1A7 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
POLR2J3Q9H1A7 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
POLR2J3Q9H1A7 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
POLR2J3Q9H1A7 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
POLR2J3Q9H1A7 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
POLR2J3Q9H1A7 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.99■□□□□ 0.15
POLR2J3Q9H1A7 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
POLR2J3Q9H1A7 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
POLR2J3Q9H1A7 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
POLR2J3Q9H1A7 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
POLR2J3Q9H1A7 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
POLR2J3Q9H1A7 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
POLR2J3Q9H1A7 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
POLR2J3Q9H1A7 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
POLR2J3Q9H1A7 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
POLR2J3Q9H1A7 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
POLR2J3Q9H1A7 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
POLR2J3Q9H1A7 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
POLR2J3Q9H1A7 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
POLR2J3Q9H1A7 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
POLR2J3Q9H1A7 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
POLR2J3Q9H1A7 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
POLR2J3Q9H1A7 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
POLR2J3Q9H1A7 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.98■□□□□ 0.15
POLR2J3Q9H1A7 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
POLR2J3Q9H1A7 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
POLR2J3Q9H1A7 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
POLR2J3Q9H1A7 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
POLR2J3Q9H1A7 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
POLR2J3Q9H1A7 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
POLR2J3Q9H1A7 SLC25A1P3-201ENST00000395415 828 ntBASIC15.98■□□□□ 0.15
POLR2J3Q9H1A7 TSPY22P-201ENST00000427496 604 ntBASIC15.98■□□□□ 0.15
POLR2J3Q9H1A7 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC15.98■□□□□ 0.15
POLR2J3Q9H1A7 AC022616.7-201ENST00000525383 220 ntBASIC15.98■□□□□ 0.15
POLR2J3Q9H1A7 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
POLR2J3Q9H1A7 CD320-202ENST00000537716 1119 ntTSL 2 BASIC15.98■□□□□ 0.15
POLR2J3Q9H1A7 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.98■□□□□ 0.15
POLR2J3Q9H1A7 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC15.98■□□□□ 0.15
POLR2J3Q9H1A7 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms