Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RSPO3Q9BXY4 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RSPO3Q9BXY4 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RSPO3Q9BXY4 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.84■□□□□ 0.13
RSPO3Q9BXY4 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RSPO3Q9BXY4 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RSPO3Q9BXY4 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
RSPO3Q9BXY4 AC006449.5-201ENST00000610658 2098 ntBASIC15.83■□□□□ 0.13
RSPO3Q9BXY4 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
RSPO3Q9BXY4 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.13
RSPO3Q9BXY4 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
RSPO3Q9BXY4 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
RSPO3Q9BXY4 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
RSPO3Q9BXY4 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
RSPO3Q9BXY4 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
RSPO3Q9BXY4 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.83■□□□□ 0.13
RSPO3Q9BXY4 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
RSPO3Q9BXY4 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RSPO3Q9BXY4 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RSPO3Q9BXY4 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.83■□□□□ 0.12
RSPO3Q9BXY4 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
RSPO3Q9BXY4 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
RSPO3Q9BXY4 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
RSPO3Q9BXY4 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
RSPO3Q9BXY4 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
RSPO3Q9BXY4 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
RSPO3Q9BXY4 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.83■□□□□ 0.12
RSPO3Q9BXY4 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC15.83■□□□□ 0.12
RSPO3Q9BXY4 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.83■□□□□ 0.12
RSPO3Q9BXY4 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.83■□□□□ 0.12
RSPO3Q9BXY4 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC15.83■□□□□ 0.12
RSPO3Q9BXY4 KRT18P35-201ENST00000510488 1269 ntBASIC15.83■□□□□ 0.12
RSPO3Q9BXY4 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.83■□□□□ 0.12
RSPO3Q9BXY4 MIR5100-201ENST00000579544 119 ntBASIC15.83■□□□□ 0.12
RSPO3Q9BXY4 AC092119.3-201ENST00000612618 583 ntBASIC15.83■□□□□ 0.12
RSPO3Q9BXY4 AC073592.4-201ENST00000623827 446 ntBASIC15.83■□□□□ 0.12
RSPO3Q9BXY4 AL590326.2-201ENST00000625139 305 ntBASIC15.83■□□□□ 0.12
RSPO3Q9BXY4 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RSPO3Q9BXY4 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RSPO3Q9BXY4 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RSPO3Q9BXY4 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
RSPO3Q9BXY4 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RSPO3Q9BXY4 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RSPO3Q9BXY4 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RSPO3Q9BXY4 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
RSPO3Q9BXY4 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.83■□□□□ 0.12
RSPO3Q9BXY4 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.83■□□□□ 0.12
RSPO3Q9BXY4 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.83■□□□□ 0.12
RSPO3Q9BXY4 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RSPO3Q9BXY4 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
RSPO3Q9BXY4 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RSPO3Q9BXY4 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.82■□□□□ 0.12
RSPO3Q9BXY4 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RSPO3Q9BXY4 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.82■□□□□ 0.12
RSPO3Q9BXY4 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RSPO3Q9BXY4 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RSPO3Q9BXY4 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RSPO3Q9BXY4 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.82■□□□□ 0.12
RSPO3Q9BXY4 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RSPO3Q9BXY4 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.82■□□□□ 0.12
RSPO3Q9BXY4 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
RSPO3Q9BXY4 DOC2GP-204ENST00000639052 2548 ntBASIC15.82■□□□□ 0.12
RSPO3Q9BXY4 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RSPO3Q9BXY4 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
RSPO3Q9BXY4 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RSPO3Q9BXY4 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
RSPO3Q9BXY4 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RSPO3Q9BXY4 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RSPO3Q9BXY4 ATP5G2P1-201ENST00000433580 426 ntBASIC15.82■□□□□ 0.12
RSPO3Q9BXY4 AP000867.3-201ENST00000524675 377 ntBASIC15.82■□□□□ 0.12
RSPO3Q9BXY4 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.82■□□□□ 0.12
RSPO3Q9BXY4 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RSPO3Q9BXY4 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC15.82■□□□□ 0.12
RSPO3Q9BXY4 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RSPO3Q9BXY4 LINC02199-201ENST00000506655 2702 ntBASIC15.82■□□□□ 0.12
RSPO3Q9BXY4 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RSPO3Q9BXY4 SIGLEC16-201ENST00000599858 1437 ntBASIC15.82■□□□□ 0.12
RSPO3Q9BXY4 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RSPO3Q9BXY4 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RSPO3Q9BXY4 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
RSPO3Q9BXY4 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.82■□□□□ 0.12
RSPO3Q9BXY4 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RSPO3Q9BXY4 HLA-A-202ENST00000376806 1854 ntBASIC15.82■□□□□ 0.12
RSPO3Q9BXY4 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.82■□□□□ 0.12
RSPO3Q9BXY4 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RSPO3Q9BXY4 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
RSPO3Q9BXY4 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.81■□□□□ 0.12
RSPO3Q9BXY4 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
RSPO3Q9BXY4 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RSPO3Q9BXY4 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RSPO3Q9BXY4 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RSPO3Q9BXY4 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RSPO3Q9BXY4 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
RSPO3Q9BXY4 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RSPO3Q9BXY4 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.81■□□□□ 0.12
RSPO3Q9BXY4 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RSPO3Q9BXY4 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RSPO3Q9BXY4 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.81■□□□□ 0.12
RSPO3Q9BXY4 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RSPO3Q9BXY4 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms