Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
YIPF4Q9BSR8 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
YIPF4Q9BSR8 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.29■□□□□ 0.2
YIPF4Q9BSR8 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
YIPF4Q9BSR8 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
YIPF4Q9BSR8 MYCLP1-201ENST00000372451 1075 ntBASIC16.29■□□□□ 0.2
YIPF4Q9BSR8 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
YIPF4Q9BSR8 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
YIPF4Q9BSR8 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
YIPF4Q9BSR8 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.29■□□□□ 0.2
YIPF4Q9BSR8 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.29■□□□□ 0.2
YIPF4Q9BSR8 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
YIPF4Q9BSR8 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.29■□□□□ 0.2
YIPF4Q9BSR8 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
YIPF4Q9BSR8 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.29■□□□□ 0.2
YIPF4Q9BSR8 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
YIPF4Q9BSR8 NPAP1P7-201ENST00000613027 823 ntBASIC16.29■□□□□ 0.2
YIPF4Q9BSR8 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
YIPF4Q9BSR8 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
YIPF4Q9BSR8 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
YIPF4Q9BSR8 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
YIPF4Q9BSR8 AC099398.1-201ENST00000567919 2776 ntBASIC16.29■□□□□ 0.2
YIPF4Q9BSR8 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
YIPF4Q9BSR8 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
YIPF4Q9BSR8 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
YIPF4Q9BSR8 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
YIPF4Q9BSR8 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
YIPF4Q9BSR8 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
YIPF4Q9BSR8 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
YIPF4Q9BSR8 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
YIPF4Q9BSR8 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
YIPF4Q9BSR8 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
YIPF4Q9BSR8 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
YIPF4Q9BSR8 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.28■□□□□ 0.2
YIPF4Q9BSR8 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
YIPF4Q9BSR8 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
YIPF4Q9BSR8 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
YIPF4Q9BSR8 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
YIPF4Q9BSR8 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
YIPF4Q9BSR8 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
YIPF4Q9BSR8 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
YIPF4Q9BSR8 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
YIPF4Q9BSR8 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
YIPF4Q9BSR8 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
YIPF4Q9BSR8 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
YIPF4Q9BSR8 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
YIPF4Q9BSR8 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
YIPF4Q9BSR8 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
YIPF4Q9BSR8 RCN1P2-201ENST00000398357 915 ntBASIC16.28■□□□□ 0.2
YIPF4Q9BSR8 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.28■□□□□ 0.2
YIPF4Q9BSR8 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
YIPF4Q9BSR8 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.28■□□□□ 0.2
YIPF4Q9BSR8 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
YIPF4Q9BSR8 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.28■□□□□ 0.2
YIPF4Q9BSR8 BNIP3P18-201ENST00000593976 575 ntBASIC16.28■□□□□ 0.2
YIPF4Q9BSR8 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.28■□□□□ 0.2
YIPF4Q9BSR8 AC011467.2-201ENST00000598425 242 ntBASIC16.28■□□□□ 0.2
YIPF4Q9BSR8 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.28■□□□□ 0.2
YIPF4Q9BSR8 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
YIPF4Q9BSR8 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.28■□□□□ 0.2
YIPF4Q9BSR8 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
YIPF4Q9BSR8 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
YIPF4Q9BSR8 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
YIPF4Q9BSR8 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.28■□□□□ 0.2
YIPF4Q9BSR8 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
YIPF4Q9BSR8 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
YIPF4Q9BSR8 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
YIPF4Q9BSR8 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.28■□□□□ 0.2
YIPF4Q9BSR8 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
YIPF4Q9BSR8 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.27■□□□□ 0.2
YIPF4Q9BSR8 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
YIPF4Q9BSR8 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
YIPF4Q9BSR8 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
YIPF4Q9BSR8 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
YIPF4Q9BSR8 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
YIPF4Q9BSR8 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
YIPF4Q9BSR8 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
YIPF4Q9BSR8 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
YIPF4Q9BSR8 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
YIPF4Q9BSR8 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
YIPF4Q9BSR8 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
YIPF4Q9BSR8 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
YIPF4Q9BSR8 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
YIPF4Q9BSR8 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.27■□□□□ 0.2
YIPF4Q9BSR8 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.27■□□□□ 0.2
YIPF4Q9BSR8 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
YIPF4Q9BSR8 IGHV3-47-201ENST00000425060 335 ntBASIC16.27■□□□□ 0.2
YIPF4Q9BSR8 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.27■□□□□ 0.2
YIPF4Q9BSR8 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.27■□□□□ 0.2
YIPF4Q9BSR8 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.27■□□□□ 0.2
YIPF4Q9BSR8 AC104819.1-201ENST00000504587 486 ntBASIC16.27■□□□□ 0.2
YIPF4Q9BSR8 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
YIPF4Q9BSR8 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
YIPF4Q9BSR8 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.27■□□□□ 0.2
YIPF4Q9BSR8 AC060834.1-201ENST00000443027 2032 ntBASIC16.27■□□□□ 0.2
YIPF4Q9BSR8 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
YIPF4Q9BSR8 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
YIPF4Q9BSR8 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
YIPF4Q9BSR8 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
YIPF4Q9BSR8 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms