Protein–RNA interactions for Protein: Q99853

FOXB1, Forkhead box protein B1, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXB1Q99853 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
FOXB1Q99853 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FOXB1Q99853 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.2■□□□□ 0.02
FOXB1Q99853 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
FOXB1Q99853 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
FOXB1Q99853 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.2■□□□□ 0.02
FOXB1Q99853 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
FOXB1Q99853 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.2■□□□□ 0.02
FOXB1Q99853 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FOXB1Q99853 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FOXB1Q99853 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
FOXB1Q99853 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FOXB1Q99853 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
FOXB1Q99853 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FOXB1Q99853 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FOXB1Q99853 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FOXB1Q99853 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FOXB1Q99853 SLC25A1P3-201ENST00000395415 828 ntBASIC15.2■□□□□ 0.02
FOXB1Q99853 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
FOXB1Q99853 LINC00982-205ENST00000420957 435 ntBASIC15.2■□□□□ 0.02
FOXB1Q99853 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.2■□□□□ 0.02
FOXB1Q99853 AC073648.2-201ENST00000510116 352 ntBASIC15.2■□□□□ 0.02
FOXB1Q99853 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
FOXB1Q99853 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.2■□□□□ 0.02
FOXB1Q99853 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.2■□□□□ 0.02
FOXB1Q99853 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
FOXB1Q99853 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC15.2■□□□□ 0.02
FOXB1Q99853 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
FOXB1Q99853 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.2■□□□□ 0.02
FOXB1Q99853 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
FOXB1Q99853 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.2■□□□□ 0.02
FOXB1Q99853 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.2■□□□□ 0.02
FOXB1Q99853 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FOXB1Q99853 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FOXB1Q99853 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
FOXB1Q99853 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
FOXB1Q99853 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
FOXB1Q99853 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.2■□□□□ 0.02
FOXB1Q99853 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FOXB1Q99853 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
FOXB1Q99853 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
FOXB1Q99853 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
FOXB1Q99853 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
FOXB1Q99853 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.19■□□□□ 0.02
FOXB1Q99853 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.19■□□□□ 0.02
FOXB1Q99853 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
FOXB1Q99853 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
FOXB1Q99853 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.19■□□□□ 0.02
FOXB1Q99853 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
FOXB1Q99853 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
FOXB1Q99853 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
FOXB1Q99853 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.19■□□□□ 0.02
FOXB1Q99853 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
FOXB1Q99853 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
FOXB1Q99853 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC15.19■□□□□ 0.02
FOXB1Q99853 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
FOXB1Q99853 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
FOXB1Q99853 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.19■□□□□ 0.02
FOXB1Q99853 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
FOXB1Q99853 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
FOXB1Q99853 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.19■□□□□ 0.02
FOXB1Q99853 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.19■□□□□ 0.02
FOXB1Q99853 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC15.19■□□□□ 0.02
FOXB1Q99853 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.19■□□□□ 0.02
FOXB1Q99853 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.19■□□□□ 0.02
FOXB1Q99853 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
FOXB1Q99853 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.19■□□□□ 0.02
FOXB1Q99853 AC021087.4-201ENST00000563761 564 ntBASIC15.19■□□□□ 0.02
FOXB1Q99853 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
FOXB1Q99853 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
FOXB1Q99853 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
FOXB1Q99853 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
FOXB1Q99853 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.19■□□□□ 0.02
FOXB1Q99853 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
FOXB1Q99853 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.19■□□□□ 0.02
FOXB1Q99853 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.19■□□□□ 0.02
FOXB1Q99853 EGFEM1P-202ENST00000431685 1563 ntBASIC15.19■□□□□ 0.02
FOXB1Q99853 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
FOXB1Q99853 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
FOXB1Q99853 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
FOXB1Q99853 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
FOXB1Q99853 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
FOXB1Q99853 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
FOXB1Q99853 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
FOXB1Q99853 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
FOXB1Q99853 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.18■□□□□ 0.02
FOXB1Q99853 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
FOXB1Q99853 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.18■□□□□ 0.02
FOXB1Q99853 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
FOXB1Q99853 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.18■□□□□ 0.02
FOXB1Q99853 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.18■□□□□ 0.02
FOXB1Q99853 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
FOXB1Q99853 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
FOXB1Q99853 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
FOXB1Q99853 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.18■□□□□ 0.02
FOXB1Q99853 AL589182.2-201ENST00000619332 1049 ntBASIC15.18■□□□□ 0.02
FOXB1Q99853 TP73-AS1-207ENST00000624167 988 ntBASIC15.18■□□□□ 0.02
FOXB1Q99853 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
FOXB1Q99853 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
FOXB1Q99853 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms