Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
PTP4A1Q93096 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
PTP4A1Q93096 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PTP4A1Q93096 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PTP4A1Q93096 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PTP4A1Q93096 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PTP4A1Q93096 AC125634.1-201ENST00000438758 1403 ntBASIC15.54■□□□□ 0.08
PTP4A1Q93096 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC15.54■□□□□ 0.08
PTP4A1Q93096 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
PTP4A1Q93096 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PTP4A1Q93096 BAALC-202ENST00000306391 243 ntTSL 5 BASIC15.54■□□□□ 0.08
PTP4A1Q93096 BAALC-204ENST00000330955 222 ntTSL 5 BASIC15.54■□□□□ 0.08
PTP4A1Q93096 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PTP4A1Q93096 MIR1224-201ENST00000408193 85 ntBASIC15.54■□□□□ 0.08
PTP4A1Q93096 AL645929.1-201ENST00000420084 975 ntBASIC15.54■□□□□ 0.08
PTP4A1Q93096 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PTP4A1Q93096 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC15.54■□□□□ 0.08
PTP4A1Q93096 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
PTP4A1Q93096 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PTP4A1Q93096 RN7SL606P-201ENST00000472779 293 ntBASIC15.54■□□□□ 0.08
PTP4A1Q93096 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC15.54■□□□□ 0.08
PTP4A1Q93096 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.54■□□□□ 0.08
PTP4A1Q93096 AC124947.2-201ENST00000547118 1133 ntBASIC15.54■□□□□ 0.08
PTP4A1Q93096 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC15.54■□□□□ 0.08
PTP4A1Q93096 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PTP4A1Q93096 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
PTP4A1Q93096 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
PTP4A1Q93096 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC15.54■□□□□ 0.08
PTP4A1Q93096 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC15.54■□□□□ 0.08
PTP4A1Q93096 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PTP4A1Q93096 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PTP4A1Q93096 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.54■□□□□ 0.08
PTP4A1Q93096 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PTP4A1Q93096 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PTP4A1Q93096 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
PTP4A1Q93096 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PTP4A1Q93096 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PTP4A1Q93096 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PTP4A1Q93096 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
PTP4A1Q93096 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
PTP4A1Q93096 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.54■□□□□ 0.08
PTP4A1Q93096 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
PTP4A1Q93096 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.53■□□□□ 0.08
PTP4A1Q93096 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PTP4A1Q93096 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
PTP4A1Q93096 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PTP4A1Q93096 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
PTP4A1Q93096 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PTP4A1Q93096 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.53■□□□□ 0.08
PTP4A1Q93096 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PTP4A1Q93096 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PTP4A1Q93096 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PTP4A1Q93096 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC15.53■□□□□ 0.08
PTP4A1Q93096 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
PTP4A1Q93096 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PTP4A1Q93096 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PTP4A1Q93096 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.53■□□□□ 0.08
PTP4A1Q93096 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
PTP4A1Q93096 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PTP4A1Q93096 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PTP4A1Q93096 AC122714.2-201ENST00000502787 707 ntBASIC15.53■□□□□ 0.08
PTP4A1Q93096 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PTP4A1Q93096 CD320-202ENST00000537716 1119 ntTSL 2 BASIC15.53■□□□□ 0.08
PTP4A1Q93096 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.53■□□□□ 0.08
PTP4A1Q93096 AL353801.3-201ENST00000609898 542 ntBASIC15.53■□□□□ 0.08
PTP4A1Q93096 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.53■□□□□ 0.08
PTP4A1Q93096 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
PTP4A1Q93096 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PTP4A1Q93096 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
PTP4A1Q93096 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PTP4A1Q93096 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.53■□□□□ 0.08
PTP4A1Q93096 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PTP4A1Q93096 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
PTP4A1Q93096 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PTP4A1Q93096 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PTP4A1Q93096 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PTP4A1Q93096 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
PTP4A1Q93096 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
PTP4A1Q93096 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.52■□□□□ 0.08
PTP4A1Q93096 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC15.52■□□□□ 0.08
PTP4A1Q93096 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.52■□□□□ 0.08
PTP4A1Q93096 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
PTP4A1Q93096 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PTP4A1Q93096 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PTP4A1Q93096 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PTP4A1Q93096 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
PTP4A1Q93096 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PTP4A1Q93096 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
PTP4A1Q93096 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PTP4A1Q93096 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PTP4A1Q93096 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PTP4A1Q93096 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PTP4A1Q93096 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PTP4A1Q93096 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PTP4A1Q93096 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.52■□□□□ 0.08
PTP4A1Q93096 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
PTP4A1Q93096 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PTP4A1Q93096 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.52■□□□□ 0.08
PTP4A1Q93096 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
PTP4A1Q93096 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms