Protein–RNA interactions for Protein: Q92973

TNPO1, Transportin-1, humanhuman

Known RBP Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1Q92973 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
TNPO1Q92973 PGR-209ENST00000617858 2816 ntTSL 5 BASIC20.57■□□□□ 0.88
TNPO1Q92973 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TNPO1Q92973 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TNPO1Q92973 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TNPO1Q92973 AC005104.2-201ENST00000427818 678 ntBASIC20.57■□□□□ 0.88
TNPO1Q92973 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.57■□□□□ 0.88
TNPO1Q92973 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC20.57■□□□□ 0.88
TNPO1Q92973 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC20.57■□□□□ 0.88
TNPO1Q92973 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TNPO1Q92973 MIR3652-201ENST00000579335 131 ntBASIC20.57■□□□□ 0.88
TNPO1Q92973 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
TNPO1Q92973 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC20.57■□□□□ 0.88
TNPO1Q92973 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.57■□□□□ 0.88
TNPO1Q92973 AC008687.5-201ENST00000593746 558 ntBASIC20.57■□□□□ 0.88
TNPO1Q92973 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC20.57■□□□□ 0.88
TNPO1Q92973 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC20.57■□□□□ 0.88
TNPO1Q92973 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TNPO1Q92973 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TNPO1Q92973 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TNPO1Q92973 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
TNPO1Q92973 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC20.56■□□□□ 0.88
TNPO1Q92973 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
TNPO1Q92973 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
TNPO1Q92973 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNPO1Q92973 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC20.56■□□□□ 0.88
TNPO1Q92973 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TNPO1Q92973 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNPO1Q92973 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNPO1Q92973 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNPO1Q92973 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNPO1Q92973 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNPO1Q92973 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TNPO1Q92973 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
TNPO1Q92973 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC20.56■□□□□ 0.88
TNPO1Q92973 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC20.56■□□□□ 0.88
TNPO1Q92973 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
TNPO1Q92973 AL450487.1-201ENST00000426799 995 ntBASIC20.56■□□□□ 0.88
TNPO1Q92973 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC20.56■□□□□ 0.88
TNPO1Q92973 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC20.56■□□□□ 0.88
TNPO1Q92973 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC20.56■□□□□ 0.88
TNPO1Q92973 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC20.56■□□□□ 0.88
TNPO1Q92973 AC090616.6-201ENST00000582640 721 ntBASIC20.56■□□□□ 0.88
TNPO1Q92973 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.56■□□□□ 0.88
TNPO1Q92973 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC20.56■□□□□ 0.88
TNPO1Q92973 AC024563.2-201ENST00000603282 481 ntBASIC20.56■□□□□ 0.88
TNPO1Q92973 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TNPO1Q92973 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
TNPO1Q92973 AL691432.3-201ENST00000621860 400 ntBASIC20.56■□□□□ 0.88
TNPO1Q92973 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNPO1Q92973 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNPO1Q92973 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNPO1Q92973 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNPO1Q92973 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNPO1Q92973 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC20.56■□□□□ 0.88
TNPO1Q92973 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TNPO1Q92973 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNPO1Q92973 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNPO1Q92973 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC20.56■□□□□ 0.88
TNPO1Q92973 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
TNPO1Q92973 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TNPO1Q92973 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TNPO1Q92973 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
TNPO1Q92973 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
TNPO1Q92973 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TNPO1Q92973 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC20.55■□□□□ 0.88
TNPO1Q92973 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TNPO1Q92973 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
TNPO1Q92973 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TNPO1Q92973 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC20.55■□□□□ 0.88
TNPO1Q92973 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TNPO1Q92973 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TNPO1Q92973 PP7080-204ENST00000510714 601 ntTSL 3 BASIC20.55■□□□□ 0.88
TNPO1Q92973 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.55■□□□□ 0.88
TNPO1Q92973 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.55■□□□□ 0.88
TNPO1Q92973 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
TNPO1Q92973 IL11-204ENST00000590625 1028 ntTSL 2 BASIC20.55■□□□□ 0.88
TNPO1Q92973 CLEC4GP1-201ENST00000596555 870 ntBASIC20.55■□□□□ 0.88
TNPO1Q92973 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC20.55■□□□□ 0.88
TNPO1Q92973 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TNPO1Q92973 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TNPO1Q92973 AL662844.4-201ENST00000606367 2838 ntBASIC20.55■□□□□ 0.88
TNPO1Q92973 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TNPO1Q92973 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TNPO1Q92973 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.55■□□□□ 0.88
TNPO1Q92973 KRT89P-201ENST00000620027 1478 ntBASIC20.55■□□□□ 0.88
TNPO1Q92973 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TNPO1Q92973 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TNPO1Q92973 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC20.55■□□□□ 0.88
TNPO1Q92973 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC20.55■□□□□ 0.88
TNPO1Q92973 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TNPO1Q92973 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TNPO1Q92973 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC20.54■□□□□ 0.88
TNPO1Q92973 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TNPO1Q92973 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TNPO1Q92973 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC20.54■□□□□ 0.88
TNPO1Q92973 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC20.54■□□□□ 0.88
TNPO1Q92973 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TNPO1Q92973 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TNPO1Q92973 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms