Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PTCD2Q8WV60 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PTCD2Q8WV60 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.52■□□□□ 0.4
PTCD2Q8WV60 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
PTCD2Q8WV60 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.52■□□□□ 0.4
PTCD2Q8WV60 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.52■□□□□ 0.4
PTCD2Q8WV60 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.52■□□□□ 0.4
PTCD2Q8WV60 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.52■□□□□ 0.4
PTCD2Q8WV60 AD001527.2-201ENST00000622994 785 ntBASIC17.52■□□□□ 0.4
PTCD2Q8WV60 AC148477.8-201ENST00000624298 468 ntBASIC17.52■□□□□ 0.4
PTCD2Q8WV60 AD000864.1-201ENST00000624076 2295 ntBASIC17.52■□□□□ 0.4
PTCD2Q8WV60 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTCD2Q8WV60 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PTCD2Q8WV60 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PTCD2Q8WV60 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PTCD2Q8WV60 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
PTCD2Q8WV60 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
PTCD2Q8WV60 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
PTCD2Q8WV60 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
PTCD2Q8WV60 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
PTCD2Q8WV60 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.51■□□□□ 0.39
PTCD2Q8WV60 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.51■□□□□ 0.39
PTCD2Q8WV60 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTCD2Q8WV60 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
PTCD2Q8WV60 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTCD2Q8WV60 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.51■□□□□ 0.39
PTCD2Q8WV60 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PTCD2Q8WV60 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTCD2Q8WV60 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTCD2Q8WV60 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTCD2Q8WV60 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTCD2Q8WV60 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTCD2Q8WV60 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTCD2Q8WV60 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
PTCD2Q8WV60 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.51■□□□□ 0.39
PTCD2Q8WV60 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTCD2Q8WV60 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
PTCD2Q8WV60 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PTCD2Q8WV60 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
PTCD2Q8WV60 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.51■□□□□ 0.39
PTCD2Q8WV60 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
PTCD2Q8WV60 AC008608.2-201ENST00000606089 416 ntBASIC17.51■□□□□ 0.39
PTCD2Q8WV60 AC009336.1-201ENST00000608941 1553 ntBASIC17.51■□□□□ 0.39
PTCD2Q8WV60 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
PTCD2Q8WV60 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTCD2Q8WV60 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PTCD2Q8WV60 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.51■□□□□ 0.39
PTCD2Q8WV60 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTCD2Q8WV60 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PTCD2Q8WV60 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTCD2Q8WV60 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTCD2Q8WV60 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.51■□□□□ 0.39
PTCD2Q8WV60 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTCD2Q8WV60 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PTCD2Q8WV60 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
PTCD2Q8WV60 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.51■□□□□ 0.39
PTCD2Q8WV60 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.5■□□□□ 0.39
PTCD2Q8WV60 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTCD2Q8WV60 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTCD2Q8WV60 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTCD2Q8WV60 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTCD2Q8WV60 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
PTCD2Q8WV60 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTCD2Q8WV60 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.5■□□□□ 0.39
PTCD2Q8WV60 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PTCD2Q8WV60 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PTCD2Q8WV60 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTCD2Q8WV60 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
PTCD2Q8WV60 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.5■□□□□ 0.39
PTCD2Q8WV60 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTCD2Q8WV60 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTCD2Q8WV60 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
PTCD2Q8WV60 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTCD2Q8WV60 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTCD2Q8WV60 KATNBL1P2-201ENST00000433311 835 ntBASIC17.5■□□□□ 0.39
PTCD2Q8WV60 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.5■□□□□ 0.39
PTCD2Q8WV60 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.5■□□□□ 0.39
PTCD2Q8WV60 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
PTCD2Q8WV60 FGFR3P6-201ENST00000457012 610 ntBASIC17.5■□□□□ 0.39
PTCD2Q8WV60 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.5■□□□□ 0.39
PTCD2Q8WV60 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.5■□□□□ 0.39
PTCD2Q8WV60 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.5■□□□□ 0.39
PTCD2Q8WV60 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.5■□□□□ 0.39
PTCD2Q8WV60 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.5■□□□□ 0.39
PTCD2Q8WV60 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
PTCD2Q8WV60 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
PTCD2Q8WV60 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTCD2Q8WV60 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PTCD2Q8WV60 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTCD2Q8WV60 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PTCD2Q8WV60 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTCD2Q8WV60 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PTCD2Q8WV60 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PTCD2Q8WV60 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTCD2Q8WV60 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PTCD2Q8WV60 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PTCD2Q8WV60 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTCD2Q8WV60 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.49■□□□□ 0.39
PTCD2Q8WV60 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.49■□□□□ 0.39
PTCD2Q8WV60 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms