Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CHD5Q8TDI0 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.33■□□□□ 0.37
CHD5Q8TDI0 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.33■□□□□ 0.37
CHD5Q8TDI0 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
CHD5Q8TDI0 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.33■□□□□ 0.37
CHD5Q8TDI0 ACTL9-202ENST00000612068 1252 ntBASIC17.33■□□□□ 0.37
CHD5Q8TDI0 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
CHD5Q8TDI0 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
CHD5Q8TDI0 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CHD5Q8TDI0 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CHD5Q8TDI0 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.33■□□□□ 0.37
CHD5Q8TDI0 PI4KAP1-204ENST00000612579 1703 ntBASIC17.33■□□□□ 0.36
CHD5Q8TDI0 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHD5Q8TDI0 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHD5Q8TDI0 AL021920.2-201ENST00000624828 1351 ntBASIC17.33■□□□□ 0.36
CHD5Q8TDI0 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CHD5Q8TDI0 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CHD5Q8TDI0 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CHD5Q8TDI0 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CHD5Q8TDI0 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHD5Q8TDI0 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.33■□□□□ 0.36
CHD5Q8TDI0 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CHD5Q8TDI0 MIR4492-201ENST00000581627 80 ntBASIC17.33■□□□□ 0.36
CHD5Q8TDI0 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.33■□□□□ 0.36
CHD5Q8TDI0 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHD5Q8TDI0 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.33■□□□□ 0.36
CHD5Q8TDI0 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHD5Q8TDI0 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHD5Q8TDI0 AC131009.4-201ENST00000624048 1740 ntBASIC17.33■□□□□ 0.36
CHD5Q8TDI0 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHD5Q8TDI0 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CHD5Q8TDI0 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHD5Q8TDI0 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHD5Q8TDI0 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHD5Q8TDI0 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHD5Q8TDI0 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.32■□□□□ 0.36
CHD5Q8TDI0 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.32■□□□□ 0.36
CHD5Q8TDI0 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.32■□□□□ 0.36
CHD5Q8TDI0 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHD5Q8TDI0 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.32■□□□□ 0.36
CHD5Q8TDI0 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.32■□□□□ 0.36
CHD5Q8TDI0 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHD5Q8TDI0 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CHD5Q8TDI0 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.32■□□□□ 0.36
CHD5Q8TDI0 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CHD5Q8TDI0 KRT18P3-201ENST00000451602 1288 ntBASIC17.32■□□□□ 0.36
CHD5Q8TDI0 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHD5Q8TDI0 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CHD5Q8TDI0 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHD5Q8TDI0 AC010327.4-202ENST00000591484 748 ntBASIC17.32■□□□□ 0.36
CHD5Q8TDI0 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.32■□□□□ 0.36
CHD5Q8TDI0 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.32■□□□□ 0.36
CHD5Q8TDI0 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHD5Q8TDI0 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.32■□□□□ 0.36
CHD5Q8TDI0 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.32■□□□□ 0.36
CHD5Q8TDI0 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHD5Q8TDI0 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CHD5Q8TDI0 TUBB8P12-201ENST00000308911 1335 ntBASIC17.32■□□□□ 0.36
CHD5Q8TDI0 TUBB7P-202ENST00000428444 1305 ntBASIC17.32■□□□□ 0.36
CHD5Q8TDI0 TUBB8P7-204ENST00000567960 1332 ntBASIC17.32■□□□□ 0.36
CHD5Q8TDI0 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHD5Q8TDI0 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.32■□□□□ 0.36
CHD5Q8TDI0 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.32■□□□□ 0.36
CHD5Q8TDI0 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHD5Q8TDI0 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.32■□□□□ 0.36
CHD5Q8TDI0 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHD5Q8TDI0 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CHD5Q8TDI0 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHD5Q8TDI0 YBX2P1-201ENST00000394192 760 ntBASIC17.31■□□□□ 0.36
CHD5Q8TDI0 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.31■□□□□ 0.36
CHD5Q8TDI0 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
CHD5Q8TDI0 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.31■□□□□ 0.36
CHD5Q8TDI0 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.31■□□□□ 0.36
CHD5Q8TDI0 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.31■□□□□ 0.36
CHD5Q8TDI0 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.31■□□□□ 0.36
CHD5Q8TDI0 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.31■□□□□ 0.36
CHD5Q8TDI0 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CHD5Q8TDI0 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHD5Q8TDI0 AC068137.2-201ENST00000605408 478 ntBASIC17.31■□□□□ 0.36
CHD5Q8TDI0 AC064836.3-201ENST00000607928 673 ntBASIC17.31■□□□□ 0.36
CHD5Q8TDI0 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CHD5Q8TDI0 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHD5Q8TDI0 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHD5Q8TDI0 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHD5Q8TDI0 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHD5Q8TDI0 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
CHD5Q8TDI0 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.31■□□□□ 0.36
CHD5Q8TDI0 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHD5Q8TDI0 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.31■□□□□ 0.36
CHD5Q8TDI0 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.31■□□□□ 0.36
CHD5Q8TDI0 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.31■□□□□ 0.36
CHD5Q8TDI0 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHD5Q8TDI0 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
CHD5Q8TDI0 KRT19P2-202ENST00000557173 1012 ntBASIC17.31■□□□□ 0.36
CHD5Q8TDI0 MIR3909-201ENST00000579518 119 ntBASIC17.31■□□□□ 0.36
CHD5Q8TDI0 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CHD5Q8TDI0 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHD5Q8TDI0 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CHD5Q8TDI0 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHD5Q8TDI0 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms