Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CFAP61Q8NHU2 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.56■□□□□ 0.4
CFAP61Q8NHU2 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CFAP61Q8NHU2 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CFAP61Q8NHU2 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CFAP61Q8NHU2 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CFAP61Q8NHU2 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CFAP61Q8NHU2 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CFAP61Q8NHU2 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CFAP61Q8NHU2 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CFAP61Q8NHU2 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CFAP61Q8NHU2 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CFAP61Q8NHU2 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CFAP61Q8NHU2 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CFAP61Q8NHU2 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CFAP61Q8NHU2 PCDH8P1-201ENST00000428983 2773 ntBASIC17.55■□□□□ 0.4
CFAP61Q8NHU2 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CFAP61Q8NHU2 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.55■□□□□ 0.4
CFAP61Q8NHU2 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CFAP61Q8NHU2 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CFAP61Q8NHU2 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CFAP61Q8NHU2 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.55■□□□□ 0.4
CFAP61Q8NHU2 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.55■□□□□ 0.4
CFAP61Q8NHU2 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CFAP61Q8NHU2 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.55■□□□□ 0.4
CFAP61Q8NHU2 AC068472.1-201ENST00000474589 881 ntBASIC17.55■□□□□ 0.4
CFAP61Q8NHU2 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CFAP61Q8NHU2 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.55■□□□□ 0.4
CFAP61Q8NHU2 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.55■□□□□ 0.4
CFAP61Q8NHU2 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.55■□□□□ 0.4
CFAP61Q8NHU2 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.55■□□□□ 0.4
CFAP61Q8NHU2 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.55■□□□□ 0.4
CFAP61Q8NHU2 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CFAP61Q8NHU2 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CFAP61Q8NHU2 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
CFAP61Q8NHU2 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CFAP61Q8NHU2 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CFAP61Q8NHU2 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.55■□□□□ 0.4
CFAP61Q8NHU2 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
CFAP61Q8NHU2 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CFAP61Q8NHU2 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CFAP61Q8NHU2 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CFAP61Q8NHU2 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.55■□□□□ 0.4
CFAP61Q8NHU2 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CFAP61Q8NHU2 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CFAP61Q8NHU2 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CFAP61Q8NHU2 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CFAP61Q8NHU2 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.54■□□□□ 0.4
CFAP61Q8NHU2 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CFAP61Q8NHU2 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CFAP61Q8NHU2 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CFAP61Q8NHU2 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.54■□□□□ 0.4
CFAP61Q8NHU2 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.54■□□□□ 0.4
CFAP61Q8NHU2 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CFAP61Q8NHU2 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CFAP61Q8NHU2 KRT18P55-202ENST00000578578 1546 ntBASIC17.54■□□□□ 0.4
CFAP61Q8NHU2 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.54■□□□□ 0.4
CFAP61Q8NHU2 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CFAP61Q8NHU2 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CFAP61Q8NHU2 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CFAP61Q8NHU2 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
CFAP61Q8NHU2 CHCHD2P8-201ENST00000429873 447 ntBASIC17.54■□□□□ 0.4
CFAP61Q8NHU2 MTCL1P1-201ENST00000446207 792 ntBASIC17.54■□□□□ 0.4
CFAP61Q8NHU2 TSSC2-201ENST00000450217 709 ntBASIC17.54■□□□□ 0.4
CFAP61Q8NHU2 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.54■□□□□ 0.4
CFAP61Q8NHU2 AC090616.6-201ENST00000582640 721 ntBASIC17.54■□□□□ 0.4
CFAP61Q8NHU2 AL592071.1-201ENST00000611956 408 ntBASIC17.54■□□□□ 0.4
CFAP61Q8NHU2 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.54■□□□□ 0.4
CFAP61Q8NHU2 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CFAP61Q8NHU2 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CFAP61Q8NHU2 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CFAP61Q8NHU2 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.54■□□□□ 0.4
CFAP61Q8NHU2 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CFAP61Q8NHU2 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CFAP61Q8NHU2 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CFAP61Q8NHU2 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CFAP61Q8NHU2 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CFAP61Q8NHU2 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CFAP61Q8NHU2 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.54■□□□□ 0.4
CFAP61Q8NHU2 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.54■□□□□ 0.4
CFAP61Q8NHU2 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CFAP61Q8NHU2 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
CFAP61Q8NHU2 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CFAP61Q8NHU2 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.54■□□□□ 0.4
CFAP61Q8NHU2 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.54■□□□□ 0.4
CFAP61Q8NHU2 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CFAP61Q8NHU2 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CFAP61Q8NHU2 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.53■□□□□ 0.4
CFAP61Q8NHU2 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.53■□□□□ 0.4
CFAP61Q8NHU2 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CFAP61Q8NHU2 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CFAP61Q8NHU2 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CFAP61Q8NHU2 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CFAP61Q8NHU2 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CFAP61Q8NHU2 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
CFAP61Q8NHU2 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
CFAP61Q8NHU2 KRT18P1-202ENST00000452408 1331 ntBASIC17.53■□□□□ 0.4
CFAP61Q8NHU2 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CFAP61Q8NHU2 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CFAP61Q8NHU2 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms