Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
CFAP43Q8NDM7 TDG-209ENST00000544861 1387 ntTSL 2 BASIC26.7■■□□□ 1.87
CFAP43Q8NDM7 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC26.7■■□□□ 1.86
CFAP43Q8NDM7 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
CFAP43Q8NDM7 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
CFAP43Q8NDM7 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
CFAP43Q8NDM7 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC26.7■■□□□ 1.86
CFAP43Q8NDM7 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC26.7■■□□□ 1.86
CFAP43Q8NDM7 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
CFAP43Q8NDM7 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC26.7■■□□□ 1.86
CFAP43Q8NDM7 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
CFAP43Q8NDM7 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
CFAP43Q8NDM7 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
CFAP43Q8NDM7 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
CFAP43Q8NDM7 SERBP1P5-201ENST00000510079 1181 ntBASIC26.7■■□□□ 1.86
CFAP43Q8NDM7 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC26.7■■□□□ 1.86
CFAP43Q8NDM7 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
CFAP43Q8NDM7 RAB34-224ENST00000636513 888 ntTSL 5 BASIC26.7■■□□□ 1.86
CFAP43Q8NDM7 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CFAP43Q8NDM7 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CFAP43Q8NDM7 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CFAP43Q8NDM7 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC26.69■■□□□ 1.86
CFAP43Q8NDM7 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC26.69■■□□□ 1.86
CFAP43Q8NDM7 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CFAP43Q8NDM7 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC26.69■■□□□ 1.86
CFAP43Q8NDM7 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC26.69■■□□□ 1.86
CFAP43Q8NDM7 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC26.69■■□□□ 1.86
CFAP43Q8NDM7 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
CFAP43Q8NDM7 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
CFAP43Q8NDM7 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CFAP43Q8NDM7 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
CFAP43Q8NDM7 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CFAP43Q8NDM7 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.86
CFAP43Q8NDM7 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC26.68■■□□□ 1.86
CFAP43Q8NDM7 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC26.68■■□□□ 1.86
CFAP43Q8NDM7 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CFAP43Q8NDM7 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
CFAP43Q8NDM7 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CFAP43Q8NDM7 CD81-202ENST00000381036 880 ntTSL 3 BASIC26.68■■□□□ 1.86
CFAP43Q8NDM7 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC26.68■■□□□ 1.86
CFAP43Q8NDM7 RBPMS2P1-201ENST00000437762 623 ntBASIC26.68■■□□□ 1.86
CFAP43Q8NDM7 AC004890.2-204ENST00000481968 304 ntBASIC26.68■■□□□ 1.86
CFAP43Q8NDM7 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC26.68■■□□□ 1.86
CFAP43Q8NDM7 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
CFAP43Q8NDM7 AC084121.4-201ENST00000641598 221 ntBASIC26.68■■□□□ 1.86
CFAP43Q8NDM7 AF228730.8-201ENST00000642140 221 ntBASIC26.68■■□□□ 1.86
CFAP43Q8NDM7 BOC-212ENST00000485230 2173 ntTSL 2 BASIC26.68■■□□□ 1.86
CFAP43Q8NDM7 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC26.68■■□□□ 1.86
CFAP43Q8NDM7 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC26.68■■□□□ 1.86
CFAP43Q8NDM7 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CFAP43Q8NDM7 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC26.67■■□□□ 1.86
CFAP43Q8NDM7 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CFAP43Q8NDM7 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CFAP43Q8NDM7 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CFAP43Q8NDM7 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC26.67■■□□□ 1.86
CFAP43Q8NDM7 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC26.67■■□□□ 1.86
CFAP43Q8NDM7 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC26.67■■□□□ 1.86
CFAP43Q8NDM7 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC26.67■■□□□ 1.86
CFAP43Q8NDM7 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC26.67■■□□□ 1.86
CFAP43Q8NDM7 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CFAP43Q8NDM7 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC26.67■■□□□ 1.86
CFAP43Q8NDM7 AC008677.1-201ENST00000519230 1561 ntBASIC26.67■■□□□ 1.86
CFAP43Q8NDM7 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CFAP43Q8NDM7 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC26.67■■□□□ 1.86
CFAP43Q8NDM7 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC26.67■■□□□ 1.86
CFAP43Q8NDM7 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC26.67■■□□□ 1.86
CFAP43Q8NDM7 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
CFAP43Q8NDM7 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CFAP43Q8NDM7 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CFAP43Q8NDM7 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CFAP43Q8NDM7 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC26.66■■□□□ 1.86
CFAP43Q8NDM7 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC26.66■■□□□ 1.86
CFAP43Q8NDM7 PPP6R2P1-201ENST00000450880 1275 ntBASIC26.66■■□□□ 1.86
CFAP43Q8NDM7 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC26.66■■□□□ 1.86
CFAP43Q8NDM7 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC26.66■■□□□ 1.86
CFAP43Q8NDM7 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC26.66■■□□□ 1.86
CFAP43Q8NDM7 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC26.66■■□□□ 1.86
CFAP43Q8NDM7 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC26.66■■□□□ 1.86
CFAP43Q8NDM7 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CFAP43Q8NDM7 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC26.66■■□□□ 1.86
CFAP43Q8NDM7 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
CFAP43Q8NDM7 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
CFAP43Q8NDM7 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
CFAP43Q8NDM7 SPDYE7P-202ENST00000420373 878 ntBASIC26.66■■□□□ 1.86
CFAP43Q8NDM7 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
CFAP43Q8NDM7 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC26.66■■□□□ 1.86
CFAP43Q8NDM7 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
CFAP43Q8NDM7 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC26.66■■□□□ 1.86
CFAP43Q8NDM7 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
CFAP43Q8NDM7 AL596325.1-201ENST00000563991 1082 ntBASIC26.66■■□□□ 1.86
CFAP43Q8NDM7 NOC2LP2-201ENST00000407594 1944 ntBASIC26.66■■□□□ 1.86
CFAP43Q8NDM7 HARS-203ENST00000431330 1774 ntTSL 2 BASIC26.66■■□□□ 1.86
CFAP43Q8NDM7 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
CFAP43Q8NDM7 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC26.65■■□□□ 1.86
CFAP43Q8NDM7 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
CFAP43Q8NDM7 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC26.65■■□□□ 1.86
CFAP43Q8NDM7 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CFAP43Q8NDM7 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
CFAP43Q8NDM7 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
CFAP43Q8NDM7 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC26.65■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms