Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC15.99■□□□□ 0.15
VRK2Q86Y07 AC074051.2-201ENST00000565115 352 ntBASIC15.99■□□□□ 0.15
VRK2Q86Y07 MIR3180-1-201ENST00000580374 94 ntBASIC15.99■□□□□ 0.15
VRK2Q86Y07 MIR3180-3-201ENST00000584616 94 ntBASIC15.99■□□□□ 0.15
VRK2Q86Y07 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
VRK2Q86Y07 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
VRK2Q86Y07 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
VRK2Q86Y07 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
VRK2Q86Y07 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.99■□□□□ 0.15
VRK2Q86Y07 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
VRK2Q86Y07 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.99■□□□□ 0.15
VRK2Q86Y07 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
VRK2Q86Y07 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
VRK2Q86Y07 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
VRK2Q86Y07 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VRK2Q86Y07 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
VRK2Q86Y07 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
VRK2Q86Y07 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
VRK2Q86Y07 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.99■□□□□ 0.15
VRK2Q86Y07 AC124067.4-201ENST00000519691 2379 ntBASIC15.99■□□□□ 0.15
VRK2Q86Y07 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
VRK2Q86Y07 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.99■□□□□ 0.15
VRK2Q86Y07 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.99■□□□□ 0.15
VRK2Q86Y07 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
VRK2Q86Y07 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
VRK2Q86Y07 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
VRK2Q86Y07 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
VRK2Q86Y07 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.98■□□□□ 0.15
VRK2Q86Y07 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
VRK2Q86Y07 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.98■□□□□ 0.15
VRK2Q86Y07 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
VRK2Q86Y07 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
VRK2Q86Y07 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.98■□□□□ 0.15
VRK2Q86Y07 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
VRK2Q86Y07 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
VRK2Q86Y07 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
VRK2Q86Y07 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
VRK2Q86Y07 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
VRK2Q86Y07 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.98■□□□□ 0.15
VRK2Q86Y07 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
VRK2Q86Y07 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.98■□□□□ 0.15
VRK2Q86Y07 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.98■□□□□ 0.15
VRK2Q86Y07 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.98■□□□□ 0.15
VRK2Q86Y07 KRT18P35-201ENST00000510488 1269 ntBASIC15.98■□□□□ 0.15
VRK2Q86Y07 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC15.98■□□□□ 0.15
VRK2Q86Y07 AP000867.3-201ENST00000524675 377 ntBASIC15.98■□□□□ 0.15
VRK2Q86Y07 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC15.98■□□□□ 0.15
VRK2Q86Y07 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.98■□□□□ 0.15
VRK2Q86Y07 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
VRK2Q86Y07 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
VRK2Q86Y07 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.98■□□□□ 0.15
VRK2Q86Y07 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
VRK2Q86Y07 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
VRK2Q86Y07 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC15.98■□□□□ 0.15
VRK2Q86Y07 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.98■□□□□ 0.15
VRK2Q86Y07 BCL10-202ENST00000620248 774 ntTSL 5 BASIC15.98■□□□□ 0.15
VRK2Q86Y07 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC15.98■□□□□ 0.15
VRK2Q86Y07 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
VRK2Q86Y07 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
VRK2Q86Y07 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
VRK2Q86Y07 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
VRK2Q86Y07 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
VRK2Q86Y07 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
VRK2Q86Y07 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.98■□□□□ 0.15
VRK2Q86Y07 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.98■□□□□ 0.15
VRK2Q86Y07 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.98■□□□□ 0.15
VRK2Q86Y07 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.98■□□□□ 0.15
VRK2Q86Y07 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
VRK2Q86Y07 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
VRK2Q86Y07 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
VRK2Q86Y07 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
VRK2Q86Y07 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
VRK2Q86Y07 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
VRK2Q86Y07 EGFEM1P-202ENST00000431685 1563 ntBASIC15.97■□□□□ 0.15
VRK2Q86Y07 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
VRK2Q86Y07 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.97■□□□□ 0.15
VRK2Q86Y07 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
VRK2Q86Y07 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
VRK2Q86Y07 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
VRK2Q86Y07 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
VRK2Q86Y07 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
VRK2Q86Y07 COPS8-203ENST00000409334 794 ntTSL 5 BASIC15.97■□□□□ 0.15
VRK2Q86Y07 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
VRK2Q86Y07 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
VRK2Q86Y07 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
VRK2Q86Y07 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
VRK2Q86Y07 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC15.97■□□□□ 0.15
VRK2Q86Y07 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
VRK2Q86Y07 RMI2-205ENST00000576027 818 ntTSL 2 BASIC15.97■□□□□ 0.15
VRK2Q86Y07 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC15.97■□□□□ 0.15
VRK2Q86Y07 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC15.97■□□□□ 0.15
VRK2Q86Y07 NPAP1P7-201ENST00000613027 823 ntBASIC15.97■□□□□ 0.15
VRK2Q86Y07 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.97■□□□□ 0.15
VRK2Q86Y07 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
VRK2Q86Y07 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
VRK2Q86Y07 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
VRK2Q86Y07 FLJ38576-201ENST00000623820 2459 ntBASIC15.97■□□□□ 0.15
VRK2Q86Y07 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
VRK2Q86Y07 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
VRK2Q86Y07 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms