Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC20.64■□□□□ 0.89
RNF20Q5VTR2 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.64■□□□□ 0.89
RNF20Q5VTR2 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
RNF20Q5VTR2 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF20Q5VTR2 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
RNF20Q5VTR2 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF20Q5VTR2 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
RNF20Q5VTR2 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF20Q5VTR2 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF20Q5VTR2 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF20Q5VTR2 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RNF20Q5VTR2 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
RNF20Q5VTR2 AC060834.1-201ENST00000443027 2032 ntBASIC20.63■□□□□ 0.89
RNF20Q5VTR2 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RNF20Q5VTR2 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF20Q5VTR2 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF20Q5VTR2 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC20.63■□□□□ 0.89
RNF20Q5VTR2 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF20Q5VTR2 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF20Q5VTR2 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RNF20Q5VTR2 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF20Q5VTR2 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
RNF20Q5VTR2 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC20.63■□□□□ 0.89
RNF20Q5VTR2 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
RNF20Q5VTR2 AC073592.4-201ENST00000623827 446 ntBASIC20.63■□□□□ 0.89
RNF20Q5VTR2 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.63■□□□□ 0.89
RNF20Q5VTR2 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF20Q5VTR2 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
RNF20Q5VTR2 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC20.63■□□□□ 0.89
RNF20Q5VTR2 AC148477.5-201ENST00000625164 1645 ntBASIC20.63■□□□□ 0.89
RNF20Q5VTR2 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC20.63■□□□□ 0.89
RNF20Q5VTR2 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC20.63■□□□□ 0.89
RNF20Q5VTR2 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC20.63■□□□□ 0.89
RNF20Q5VTR2 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF20Q5VTR2 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC20.63■□□□□ 0.89
RNF20Q5VTR2 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC20.63■□□□□ 0.89
RNF20Q5VTR2 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
RNF20Q5VTR2 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF20Q5VTR2 AP005117.1-201ENST00000584346 1413 ntBASIC20.62■□□□□ 0.89
RNF20Q5VTR2 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RNF20Q5VTR2 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
RNF20Q5VTR2 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF20Q5VTR2 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF20Q5VTR2 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF20Q5VTR2 ACTG1P4-201ENST00000425123 1122 ntBASIC20.62■□□□□ 0.89
RNF20Q5VTR2 AC132008.2-207ENST00000454517 770 ntBASIC20.62■□□□□ 0.89
RNF20Q5VTR2 AC124947.2-201ENST00000547118 1133 ntBASIC20.62■□□□□ 0.89
RNF20Q5VTR2 AL121772.3-201ENST00000610840 674 ntBASIC20.62■□□□□ 0.89
RNF20Q5VTR2 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC20.62■□□□□ 0.89
RNF20Q5VTR2 AC079776.2-201ENST00000641154 1609 ntBASIC20.62■□□□□ 0.89
RNF20Q5VTR2 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF20Q5VTR2 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
RNF20Q5VTR2 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
RNF20Q5VTR2 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC20.61■□□□□ 0.89
RNF20Q5VTR2 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RNF20Q5VTR2 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RNF20Q5VTR2 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC20.61■□□□□ 0.89
RNF20Q5VTR2 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC20.61■□□□□ 0.89
RNF20Q5VTR2 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RNF20Q5VTR2 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC20.61■□□□□ 0.89
RNF20Q5VTR2 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RNF20Q5VTR2 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF20Q5VTR2 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF20Q5VTR2 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF20Q5VTR2 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF20Q5VTR2 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
RNF20Q5VTR2 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RNF20Q5VTR2 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF20Q5VTR2 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RNF20Q5VTR2 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF20Q5VTR2 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RNF20Q5VTR2 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RNF20Q5VTR2 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC20.61■□□□□ 0.89
RNF20Q5VTR2 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC20.61■□□□□ 0.89
RNF20Q5VTR2 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RNF20Q5VTR2 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF20Q5VTR2 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF20Q5VTR2 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF20Q5VTR2 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC20.6■□□□□ 0.89
RNF20Q5VTR2 PCDHA12-202ENST00000613593 2588 ntBASIC20.6■□□□□ 0.89
RNF20Q5VTR2 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RNF20Q5VTR2 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
RNF20Q5VTR2 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF20Q5VTR2 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.6■□□□□ 0.89
RNF20Q5VTR2 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RNF20Q5VTR2 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC20.6■□□□□ 0.89
RNF20Q5VTR2 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RNF20Q5VTR2 S100A2-206ENST00000497140 697 ntTSL 2 BASIC20.6■□□□□ 0.89
RNF20Q5VTR2 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC20.6■□□□□ 0.89
RNF20Q5VTR2 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC20.6■□□□□ 0.89
RNF20Q5VTR2 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC20.6■□□□□ 0.89
RNF20Q5VTR2 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC20.6■□□□□ 0.89
RNF20Q5VTR2 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF20Q5VTR2 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RNF20Q5VTR2 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF20Q5VTR2 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RNF20Q5VTR2 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
RNF20Q5VTR2 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF20Q5VTR2 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC20.6■□□□□ 0.89
RNF20Q5VTR2 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms