Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00242Q5T6M2 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
LINC00242Q5T6M2 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00242Q5T6M2 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC11.84□□□□□ -0.51
LINC00242Q5T6M2 TBC1D3P5-201ENST00000579401 1545 ntBASIC11.84□□□□□ -0.51
LINC00242Q5T6M2 AL662844.4-201ENST00000606367 2838 ntBASIC11.84□□□□□ -0.51
LINC00242Q5T6M2 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00242Q5T6M2 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00242Q5T6M2 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC11.84□□□□□ -0.51
LINC00242Q5T6M2 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00242Q5T6M2 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
LINC00242Q5T6M2 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
LINC00242Q5T6M2 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00242Q5T6M2 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00242Q5T6M2 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00242Q5T6M2 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC11.84□□□□□ -0.51
LINC00242Q5T6M2 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00242Q5T6M2 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00242Q5T6M2 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00242Q5T6M2 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC11.84□□□□□ -0.51
LINC00242Q5T6M2 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC11.84□□□□□ -0.51
LINC00242Q5T6M2 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
LINC00242Q5T6M2 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC11.83□□□□□ -0.51
LINC00242Q5T6M2 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC11.83□□□□□ -0.51
LINC00242Q5T6M2 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
LINC00242Q5T6M2 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00242Q5T6M2 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC11.83□□□□□ -0.52
LINC00242Q5T6M2 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00242Q5T6M2 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
LINC00242Q5T6M2 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC11.83□□□□□ -0.52
LINC00242Q5T6M2 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00242Q5T6M2 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC11.83□□□□□ -0.52
LINC00242Q5T6M2 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00242Q5T6M2 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC11.83□□□□□ -0.52
LINC00242Q5T6M2 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00242Q5T6M2 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
LINC00242Q5T6M2 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00242Q5T6M2 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC11.83□□□□□ -0.52
LINC00242Q5T6M2 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00242Q5T6M2 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC11.83□□□□□ -0.52
LINC00242Q5T6M2 BAALC-201ENST00000297574 801 ntTSL 3 BASIC11.83□□□□□ -0.52
LINC00242Q5T6M2 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00242Q5T6M2 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00242Q5T6M2 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00242Q5T6M2 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00242Q5T6M2 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC11.83□□□□□ -0.52
LINC00242Q5T6M2 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00242Q5T6M2 AC068472.1-201ENST00000474589 881 ntBASIC11.83□□□□□ -0.52
LINC00242Q5T6M2 AC008550.1-201ENST00000511500 884 ntBASIC11.83□□□□□ -0.52
LINC00242Q5T6M2 IGHV3-52-201ENST00000519770 353 ntBASIC11.83□□□□□ -0.52
LINC00242Q5T6M2 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC11.83□□□□□ -0.52
LINC00242Q5T6M2 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC11.83□□□□□ -0.52
LINC00242Q5T6M2 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00242Q5T6M2 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00242Q5T6M2 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00242Q5T6M2 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00242Q5T6M2 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00242Q5T6M2 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00242Q5T6M2 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00242Q5T6M2 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00242Q5T6M2 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00242Q5T6M2 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00242Q5T6M2 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00242Q5T6M2 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00242Q5T6M2 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00242Q5T6M2 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00242Q5T6M2 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC11.83□□□□□ -0.52
LINC00242Q5T6M2 AC097374.2-201ENST00000618617 1306 ntBASIC11.83□□□□□ -0.52
LINC00242Q5T6M2 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00242Q5T6M2 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00242Q5T6M2 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
LINC00242Q5T6M2 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00242Q5T6M2 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 AL513523.2-202ENST00000427283 2040 ntBASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 CRAT-202ENST00000393384 973 ntTSL 2 BASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms