Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
LDLRAP1Q5SW96 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LDLRAP1Q5SW96 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LDLRAP1Q5SW96 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LDLRAP1Q5SW96 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.22■□□□□ 0.35
LDLRAP1Q5SW96 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LDLRAP1Q5SW96 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LDLRAP1Q5SW96 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.22■□□□□ 0.35
LDLRAP1Q5SW96 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
LDLRAP1Q5SW96 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LDLRAP1Q5SW96 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
LDLRAP1Q5SW96 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LDLRAP1Q5SW96 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.22■□□□□ 0.35
LDLRAP1Q5SW96 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.22■□□□□ 0.35
LDLRAP1Q5SW96 FAM197Y8-203ENST00000450145 560 ntBASIC17.22■□□□□ 0.35
LDLRAP1Q5SW96 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
LDLRAP1Q5SW96 AL160237.2-201ENST00000556165 472 ntBASIC17.22■□□□□ 0.35
LDLRAP1Q5SW96 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.22■□□□□ 0.35
LDLRAP1Q5SW96 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.22■□□□□ 0.35
LDLRAP1Q5SW96 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
LDLRAP1Q5SW96 MTDHP4-201ENST00000600287 670 ntBASIC17.22■□□□□ 0.35
LDLRAP1Q5SW96 AC104692.2-201ENST00000603054 253 ntBASIC17.22■□□□□ 0.35
LDLRAP1Q5SW96 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.22■□□□□ 0.35
LDLRAP1Q5SW96 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.22■□□□□ 0.35
LDLRAP1Q5SW96 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LDLRAP1Q5SW96 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.22■□□□□ 0.35
LDLRAP1Q5SW96 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LDLRAP1Q5SW96 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LDLRAP1Q5SW96 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.22■□□□□ 0.35
LDLRAP1Q5SW96 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LDLRAP1Q5SW96 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LDLRAP1Q5SW96 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LDLRAP1Q5SW96 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LDLRAP1Q5SW96 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LDLRAP1Q5SW96 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LDLRAP1Q5SW96 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.21■□□□□ 0.35
LDLRAP1Q5SW96 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LDLRAP1Q5SW96 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
LDLRAP1Q5SW96 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LDLRAP1Q5SW96 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LDLRAP1Q5SW96 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
LDLRAP1Q5SW96 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
LDLRAP1Q5SW96 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
LDLRAP1Q5SW96 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
LDLRAP1Q5SW96 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LDLRAP1Q5SW96 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LDLRAP1Q5SW96 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LDLRAP1Q5SW96 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
LDLRAP1Q5SW96 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.21■□□□□ 0.35
LDLRAP1Q5SW96 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.21■□□□□ 0.35
LDLRAP1Q5SW96 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
LDLRAP1Q5SW96 AF186996.4-201ENST00000467186 377 ntBASIC17.21■□□□□ 0.35
LDLRAP1Q5SW96 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.21■□□□□ 0.35
LDLRAP1Q5SW96 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.21■□□□□ 0.35
LDLRAP1Q5SW96 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.21■□□□□ 0.35
LDLRAP1Q5SW96 AC021087.4-201ENST00000563761 564 ntBASIC17.21■□□□□ 0.35
LDLRAP1Q5SW96 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
LDLRAP1Q5SW96 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.21■□□□□ 0.35
LDLRAP1Q5SW96 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.21■□□□□ 0.35
LDLRAP1Q5SW96 TP73-AS1-207ENST00000624167 988 ntBASIC17.21■□□□□ 0.35
LDLRAP1Q5SW96 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LDLRAP1Q5SW96 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LDLRAP1Q5SW96 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.21■□□□□ 0.35
LDLRAP1Q5SW96 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
LDLRAP1Q5SW96 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LDLRAP1Q5SW96 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
LDLRAP1Q5SW96 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
LDLRAP1Q5SW96 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.21■□□□□ 0.34
LDLRAP1Q5SW96 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
LDLRAP1Q5SW96 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.21■□□□□ 0.34
LDLRAP1Q5SW96 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
LDLRAP1Q5SW96 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LDLRAP1Q5SW96 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LDLRAP1Q5SW96 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.2■□□□□ 0.34
LDLRAP1Q5SW96 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LDLRAP1Q5SW96 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LDLRAP1Q5SW96 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LDLRAP1Q5SW96 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.2■□□□□ 0.34
LDLRAP1Q5SW96 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.2■□□□□ 0.34
LDLRAP1Q5SW96 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LDLRAP1Q5SW96 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.2■□□□□ 0.34
LDLRAP1Q5SW96 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.2■□□□□ 0.34
LDLRAP1Q5SW96 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.2■□□□□ 0.34
LDLRAP1Q5SW96 KRT18P67-201ENST00000432816 1264 ntBASIC17.2■□□□□ 0.34
LDLRAP1Q5SW96 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.2■□□□□ 0.34
LDLRAP1Q5SW96 AP002469.2-201ENST00000531724 424 ntBASIC17.2■□□□□ 0.34
LDLRAP1Q5SW96 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
LDLRAP1Q5SW96 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.2■□□□□ 0.34
LDLRAP1Q5SW96 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.2■□□□□ 0.34
LDLRAP1Q5SW96 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
LDLRAP1Q5SW96 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
LDLRAP1Q5SW96 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LDLRAP1Q5SW96 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
LDLRAP1Q5SW96 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.2■□□□□ 0.34
LDLRAP1Q5SW96 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.2■□□□□ 0.34
LDLRAP1Q5SW96 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
LDLRAP1Q5SW96 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
LDLRAP1Q5SW96 AC004817.3-201ENST00000602957 2129 ntBASIC17.2■□□□□ 0.34
LDLRAP1Q5SW96 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
LDLRAP1Q5SW96 AL135999.2-201ENST00000622438 1686 ntBASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms