Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
LONRF3Q496Y0 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19.65■□□□□ 0.74
LONRF3Q496Y0 PKD1P1-201ENST00000458669 6805 ntBASIC19.65■□□□□ 0.74
LONRF3Q496Y0 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LONRF3Q496Y0 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LONRF3Q496Y0 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LONRF3Q496Y0 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LONRF3Q496Y0 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LONRF3Q496Y0 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
LONRF3Q496Y0 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LONRF3Q496Y0 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC19.65■□□□□ 0.74
LONRF3Q496Y0 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LONRF3Q496Y0 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LONRF3Q496Y0 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC19.65■□□□□ 0.74
LONRF3Q496Y0 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LONRF3Q496Y0 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.65■□□□□ 0.74
LONRF3Q496Y0 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.65■□□□□ 0.74
LONRF3Q496Y0 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LONRF3Q496Y0 MIR5100-201ENST00000579544 119 ntBASIC19.65■□□□□ 0.74
LONRF3Q496Y0 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.65■□□□□ 0.74
LONRF3Q496Y0 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
LONRF3Q496Y0 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.65■□□□□ 0.74
LONRF3Q496Y0 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
LONRF3Q496Y0 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LONRF3Q496Y0 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LONRF3Q496Y0 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC19.65■□□□□ 0.74
LONRF3Q496Y0 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LONRF3Q496Y0 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC19.65■□□□□ 0.74
LONRF3Q496Y0 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LONRF3Q496Y0 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LONRF3Q496Y0 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LONRF3Q496Y0 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LONRF3Q496Y0 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
LONRF3Q496Y0 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
LONRF3Q496Y0 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC19.64■□□□□ 0.74
LONRF3Q496Y0 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC19.64■□□□□ 0.74
LONRF3Q496Y0 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
LONRF3Q496Y0 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC19.64■□□□□ 0.73
LONRF3Q496Y0 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LONRF3Q496Y0 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
LONRF3Q496Y0 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
LONRF3Q496Y0 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.64■□□□□ 0.73
LONRF3Q496Y0 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LONRF3Q496Y0 RCN1P2-201ENST00000398357 915 ntBASIC19.64■□□□□ 0.73
LONRF3Q496Y0 THAP5-204ENST00000438865 868 ntTSL 2 BASIC19.64■□□□□ 0.73
LONRF3Q496Y0 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.64■□□□□ 0.73
LONRF3Q496Y0 AC122714.2-201ENST00000502787 707 ntBASIC19.64■□□□□ 0.73
LONRF3Q496Y0 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.64■□□□□ 0.73
LONRF3Q496Y0 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.64■□□□□ 0.73
LONRF3Q496Y0 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
LONRF3Q496Y0 SLC25A6P4-201ENST00000586535 553 ntBASIC19.64■□□□□ 0.73
LONRF3Q496Y0 REXO1L6P-202ENST00000619970 1078 ntBASIC19.64■□□□□ 0.73
LONRF3Q496Y0 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.64■□□□□ 0.73
LONRF3Q496Y0 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.64■□□□□ 0.73
LONRF3Q496Y0 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC19.64■□□□□ 0.73
LONRF3Q496Y0 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LONRF3Q496Y0 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LONRF3Q496Y0 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.64■□□□□ 0.73
LONRF3Q496Y0 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LONRF3Q496Y0 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LONRF3Q496Y0 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
LONRF3Q496Y0 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC19.64■□□□□ 0.73
LONRF3Q496Y0 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LONRF3Q496Y0 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LONRF3Q496Y0 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
LONRF3Q496Y0 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LONRF3Q496Y0 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC19.63■□□□□ 0.73
LONRF3Q496Y0 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC19.63■□□□□ 0.73
LONRF3Q496Y0 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
LONRF3Q496Y0 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LONRF3Q496Y0 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC19.63■□□□□ 0.73
LONRF3Q496Y0 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LONRF3Q496Y0 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC19.63■□□□□ 0.73
LONRF3Q496Y0 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
LONRF3Q496Y0 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LONRF3Q496Y0 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
LONRF3Q496Y0 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
LONRF3Q496Y0 MYCLP1-201ENST00000372451 1075 ntBASIC19.63■□□□□ 0.73
LONRF3Q496Y0 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LONRF3Q496Y0 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
LONRF3Q496Y0 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.63■□□□□ 0.73
LONRF3Q496Y0 AC132008.2-207ENST00000454517 770 ntBASIC19.63■□□□□ 0.73
LONRF3Q496Y0 SAPCD2P3-201ENST00000455031 850 ntBASIC19.63■□□□□ 0.73
LONRF3Q496Y0 MOK-208ENST00000519058 917 ntTSL 2 BASIC19.63■□□□□ 0.73
LONRF3Q496Y0 IGHV3-52-201ENST00000519770 353 ntBASIC19.63■□□□□ 0.73
LONRF3Q496Y0 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC19.63■□□□□ 0.73
LONRF3Q496Y0 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC19.63■□□□□ 0.73
LONRF3Q496Y0 TP73-AS1-207ENST00000624167 988 ntBASIC19.63■□□□□ 0.73
LONRF3Q496Y0 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
LONRF3Q496Y0 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
LONRF3Q496Y0 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LONRF3Q496Y0 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LONRF3Q496Y0 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
LONRF3Q496Y0 AC005915.1-201ENST00000624912 2018 ntBASIC19.63■□□□□ 0.73
LONRF3Q496Y0 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
LONRF3Q496Y0 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LONRF3Q496Y0 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LONRF3Q496Y0 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
LONRF3Q496Y0 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC19.62■□□□□ 0.73
LONRF3Q496Y0 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms