Protein–RNA interactions for Protein: Q09470

KCNA1, Potassium voltage-gated channel subfamily A member 1, humanhuman

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA1Q09470 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
KCNA1Q09470 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
KCNA1Q09470 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KCNA1Q09470 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
KCNA1Q09470 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
KCNA1Q09470 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
KCNA1Q09470 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.96■□□□□ 0.63
KCNA1Q09470 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
KCNA1Q09470 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.96■□□□□ 0.63
KCNA1Q09470 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KCNA1Q09470 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KCNA1Q09470 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.96■□□□□ 0.63
KCNA1Q09470 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.96■□□□□ 0.63
KCNA1Q09470 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
KCNA1Q09470 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
KCNA1Q09470 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KCNA1Q09470 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KCNA1Q09470 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
KCNA1Q09470 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.96■□□□□ 0.63
KCNA1Q09470 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.96■□□□□ 0.63
KCNA1Q09470 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
KCNA1Q09470 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
KCNA1Q09470 FAAHP1-202ENST00000446499 1238 ntBASIC18.96■□□□□ 0.63
KCNA1Q09470 AC009078.2-202ENST00000463353 338 ntBASIC18.96■□□□□ 0.63
KCNA1Q09470 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
KCNA1Q09470 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.96■□□□□ 0.63
KCNA1Q09470 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
KCNA1Q09470 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.96■□□□□ 0.63
KCNA1Q09470 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
KCNA1Q09470 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.96■□□□□ 0.63
KCNA1Q09470 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.96■□□□□ 0.63
KCNA1Q09470 AL353135.1-201ENST00000606729 504 ntBASIC18.96■□□□□ 0.63
KCNA1Q09470 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.96■□□□□ 0.63
KCNA1Q09470 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.96■□□□□ 0.63
KCNA1Q09470 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.96■□□□□ 0.63
KCNA1Q09470 EGFEM1P-202ENST00000431685 1563 ntBASIC18.96■□□□□ 0.63
KCNA1Q09470 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.96■□□□□ 0.63
KCNA1Q09470 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.96■□□□□ 0.63
KCNA1Q09470 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KCNA1Q09470 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.96■□□□□ 0.63
KCNA1Q09470 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KCNA1Q09470 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
KCNA1Q09470 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
KCNA1Q09470 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KCNA1Q09470 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
KCNA1Q09470 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
KCNA1Q09470 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KCNA1Q09470 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KCNA1Q09470 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KCNA1Q09470 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KCNA1Q09470 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.95■□□□□ 0.62
KCNA1Q09470 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
KCNA1Q09470 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
KCNA1Q09470 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
KCNA1Q09470 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.95■□□□□ 0.62
KCNA1Q09470 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
KCNA1Q09470 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.95■□□□□ 0.62
KCNA1Q09470 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
KCNA1Q09470 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KCNA1Q09470 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KCNA1Q09470 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KCNA1Q09470 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KCNA1Q09470 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.95■□□□□ 0.62
KCNA1Q09470 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
KCNA1Q09470 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KCNA1Q09470 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.95■□□□□ 0.62
KCNA1Q09470 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.95■□□□□ 0.62
KCNA1Q09470 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.95■□□□□ 0.62
KCNA1Q09470 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
KCNA1Q09470 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
KCNA1Q09470 AL160237.2-201ENST00000556165 472 ntBASIC18.95■□□□□ 0.62
KCNA1Q09470 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
KCNA1Q09470 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KCNA1Q09470 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
KCNA1Q09470 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
KCNA1Q09470 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
KCNA1Q09470 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.95■□□□□ 0.62
KCNA1Q09470 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KCNA1Q09470 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KCNA1Q09470 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.95■□□□□ 0.62
KCNA1Q09470 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
KCNA1Q09470 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.94■□□□□ 0.62
KCNA1Q09470 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
KCNA1Q09470 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
KCNA1Q09470 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
KCNA1Q09470 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
KCNA1Q09470 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
KCNA1Q09470 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
KCNA1Q09470 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.94■□□□□ 0.62
KCNA1Q09470 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
KCNA1Q09470 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.94■□□□□ 0.62
KCNA1Q09470 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
KCNA1Q09470 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.94■□□□□ 0.62
KCNA1Q09470 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
KCNA1Q09470 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.94■□□□□ 0.62
KCNA1Q09470 AC012640.2-201ENST00000561606 901 ntBASIC18.94■□□□□ 0.62
KCNA1Q09470 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.94■□□□□ 0.62
KCNA1Q09470 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.94■□□□□ 0.62
KCNA1Q09470 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.94■□□□□ 0.62
KCNA1Q09470 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms