Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC13.29□□□□□ -0.28
HIST1H1AQ02539 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H1AQ02539 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
HIST1H1AQ02539 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC13.29□□□□□ -0.28
HIST1H1AQ02539 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H1AQ02539 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
HIST1H1AQ02539 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
HIST1H1AQ02539 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
HIST1H1AQ02539 AC092850.2-201ENST00000623821 2697 ntBASIC13.28□□□□□ -0.28
HIST1H1AQ02539 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
HIST1H1AQ02539 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H1AQ02539 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H1AQ02539 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC13.28□□□□□ -0.28
HIST1H1AQ02539 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
HIST1H1AQ02539 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H1AQ02539 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H1AQ02539 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.28□□□□□ -0.28
HIST1H1AQ02539 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
HIST1H1AQ02539 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H1AQ02539 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H1AQ02539 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H1AQ02539 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H1AQ02539 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC13.28□□□□□ -0.28
HIST1H1AQ02539 RNF152P1-201ENST00000397754 604 ntBASIC13.28□□□□□ -0.28
HIST1H1AQ02539 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H1AQ02539 AK4P3-201ENST00000418260 669 ntBASIC13.28□□□□□ -0.28
HIST1H1AQ02539 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC13.28□□□□□ -0.28
HIST1H1AQ02539 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC13.28□□□□□ -0.28
HIST1H1AQ02539 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC13.28□□□□□ -0.28
HIST1H1AQ02539 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC13.28□□□□□ -0.28
HIST1H1AQ02539 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC13.28□□□□□ -0.28
HIST1H1AQ02539 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC13.28□□□□□ -0.28
HIST1H1AQ02539 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H1AQ02539 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC13.28□□□□□ -0.28
HIST1H1AQ02539 AC012306.2-201ENST00000609350 630 ntBASIC13.28□□□□□ -0.28
HIST1H1AQ02539 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H1AQ02539 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC13.28□□□□□ -0.28
HIST1H1AQ02539 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC13.28□□□□□ -0.28
HIST1H1AQ02539 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
HIST1H1AQ02539 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H1AQ02539 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H1AQ02539 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H1AQ02539 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H1AQ02539 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H1AQ02539 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H1AQ02539 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC13.28□□□□□ -0.28
HIST1H1AQ02539 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
HIST1H1AQ02539 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
HIST1H1AQ02539 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC13.28□□□□□ -0.28
HIST1H1AQ02539 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H1AQ02539 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
HIST1H1AQ02539 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC13.27□□□□□ -0.28
HIST1H1AQ02539 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HIST1H1AQ02539 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
HIST1H1AQ02539 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HIST1H1AQ02539 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HIST1H1AQ02539 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
HIST1H1AQ02539 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
HIST1H1AQ02539 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC13.27□□□□□ -0.28
HIST1H1AQ02539 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
HIST1H1AQ02539 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HIST1H1AQ02539 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
HIST1H1AQ02539 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HIST1H1AQ02539 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
HIST1H1AQ02539 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.28
HIST1H1AQ02539 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
HIST1H1AQ02539 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
HIST1H1AQ02539 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
HIST1H1AQ02539 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC13.27□□□□□ -0.29
HIST1H1AQ02539 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
HIST1H1AQ02539 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
HIST1H1AQ02539 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
HIST1H1AQ02539 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HIST1H1AQ02539 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HIST1H1AQ02539 IGHGP-201ENST00000390555 1178 ntBASIC13.27□□□□□ -0.29
HIST1H1AQ02539 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
HIST1H1AQ02539 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
HIST1H1AQ02539 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC13.27□□□□□ -0.29
HIST1H1AQ02539 TSPY5P-201ENST00000426936 936 ntBASIC13.27□□□□□ -0.29
HIST1H1AQ02539 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC13.27□□□□□ -0.29
HIST1H1AQ02539 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC13.27□□□□□ -0.29
HIST1H1AQ02539 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HIST1H1AQ02539 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC13.27□□□□□ -0.29
HIST1H1AQ02539 AC112698.1-201ENST00000510299 916 ntBASIC13.27□□□□□ -0.29
HIST1H1AQ02539 P4HB-223ENST00000576390 439 ntTSL 4 BASIC13.27□□□□□ -0.29
HIST1H1AQ02539 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC13.27□□□□□ -0.29
HIST1H1AQ02539 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC13.27□□□□□ -0.29
HIST1H1AQ02539 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
HIST1H1AQ02539 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HIST1H1AQ02539 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HIST1H1AQ02539 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC13.27□□□□□ -0.29
HIST1H1AQ02539 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
HIST1H1AQ02539 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HIST1H1AQ02539 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HIST1H1AQ02539 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HIST1H1AQ02539 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
HIST1H1AQ02539 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HIST1H1AQ02539 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
HIST1H1AQ02539 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC13.27□□□□□ -0.29
HIST1H1AQ02539 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms