Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 AF228730.7-201ENST00000641842 219 ntBASIC12.87□□□□□ -0.35
CMC4P56277 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CMC4P56277 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC12.87□□□□□ -0.35
CMC4P56277 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CMC4P56277 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CMC4P56277 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CMC4P56277 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CMC4P56277 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CMC4P56277 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CMC4P56277 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CMC4P56277 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CMC4P56277 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC12.87□□□□□ -0.35
CMC4P56277 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC12.87□□□□□ -0.35
CMC4P56277 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CMC4P56277 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CMC4P56277 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CMC4P56277 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CMC4P56277 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CMC4P56277 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CMC4P56277 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CMC4P56277 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC12.86□□□□□ -0.35
CMC4P56277 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CMC4P56277 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CMC4P56277 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
CMC4P56277 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CMC4P56277 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CMC4P56277 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CMC4P56277 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CMC4P56277 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC12.86□□□□□ -0.35
CMC4P56277 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CMC4P56277 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CMC4P56277 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CMC4P56277 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CMC4P56277 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CMC4P56277 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CMC4P56277 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC12.86□□□□□ -0.35
CMC4P56277 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC12.86□□□□□ -0.35
CMC4P56277 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CMC4P56277 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC12.86□□□□□ -0.35
CMC4P56277 ATP6V0CP3-201ENST00000417255 467 ntBASIC12.86□□□□□ -0.35
CMC4P56277 AC018712.1-201ENST00000455767 687 ntBASIC12.86□□□□□ -0.35
CMC4P56277 AC136632.2-201ENST00000512891 861 ntBASIC12.86□□□□□ -0.35
CMC4P56277 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC12.86□□□□□ -0.35
CMC4P56277 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CMC4P56277 ETFA-208ENST00000559602 792 ntTSL 3 BASIC12.86□□□□□ -0.35
CMC4P56277 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC12.86□□□□□ -0.35
CMC4P56277 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC12.86□□□□□ -0.35
CMC4P56277 KLK8-205ENST00000593490 267 ntTSL 3 BASIC12.86□□□□□ -0.35
CMC4P56277 AC025062.2-201ENST00000605477 670 ntBASIC12.86□□□□□ -0.35
CMC4P56277 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC12.86□□□□□ -0.35
CMC4P56277 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC12.86□□□□□ -0.35
CMC4P56277 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
CMC4P56277 ABBA01031661.1-201ENST00000634362 1253 ntBASIC12.86□□□□□ -0.35
CMC4P56277 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC12.86□□□□□ -0.35
CMC4P56277 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CMC4P56277 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CMC4P56277 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CMC4P56277 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CMC4P56277 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC12.86□□□□□ -0.35
CMC4P56277 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CMC4P56277 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CMC4P56277 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CMC4P56277 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC12.86□□□□□ -0.35
CMC4P56277 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CMC4P56277 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC12.86□□□□□ -0.35
CMC4P56277 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CMC4P56277 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC12.85□□□□□ -0.35
CMC4P56277 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CMC4P56277 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CMC4P56277 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CMC4P56277 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CMC4P56277 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC12.85□□□□□ -0.35
CMC4P56277 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CMC4P56277 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CMC4P56277 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC12.85□□□□□ -0.35
CMC4P56277 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC12.85□□□□□ -0.35
CMC4P56277 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CMC4P56277 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CMC4P56277 AP002414.1-201ENST00000391405 1147 ntBASIC12.85□□□□□ -0.35
CMC4P56277 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC12.85□□□□□ -0.35
CMC4P56277 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CMC4P56277 AC026396.1-201ENST00000419388 421 ntBASIC12.85□□□□□ -0.35
CMC4P56277 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC12.85□□□□□ -0.35
CMC4P56277 RPS2P1-201ENST00000434010 821 ntBASIC12.85□□□□□ -0.35
CMC4P56277 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC12.85□□□□□ -0.35
CMC4P56277 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CMC4P56277 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC12.85□□□□□ -0.35
CMC4P56277 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC12.85□□□□□ -0.35
CMC4P56277 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC12.85□□□□□ -0.35
CMC4P56277 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC12.85□□□□□ -0.35
CMC4P56277 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CMC4P56277 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC12.85□□□□□ -0.35
CMC4P56277 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
CMC4P56277 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CMC4P56277 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CMC4P56277 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC12.85□□□□□ -0.35
CMC4P56277 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CMC4P56277 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
CMC4P56277 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC12.85□□□□□ -0.35
CMC4P56277 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms