Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CDH6P55285 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
CDH6P55285 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CDH6P55285 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH6P55285 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.98■□□□□ 0.47
CDH6P55285 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CDH6P55285 AC148477.5-201ENST00000625164 1645 ntBASIC17.98■□□□□ 0.47
CDH6P55285 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH6P55285 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH6P55285 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.98■□□□□ 0.47
CDH6P55285 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH6P55285 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
CDH6P55285 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.98■□□□□ 0.47
CDH6P55285 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH6P55285 AL020989.1-201ENST00000422979 469 ntBASIC17.98■□□□□ 0.47
CDH6P55285 ABCD1P5-201ENST00000445663 754 ntBASIC17.98■□□□□ 0.47
CDH6P55285 NUS1P1-201ENST00000446295 882 ntBASIC17.98■□□□□ 0.47
CDH6P55285 KRT16P4-201ENST00000453883 522 ntBASIC17.98■□□□□ 0.47
CDH6P55285 FOSL1P1-201ENST00000511041 816 ntBASIC17.98■□□□□ 0.47
CDH6P55285 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.98■□□□□ 0.47
CDH6P55285 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.98■□□□□ 0.47
CDH6P55285 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.98■□□□□ 0.47
CDH6P55285 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.98■□□□□ 0.47
CDH6P55285 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.98■□□□□ 0.47
CDH6P55285 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.98■□□□□ 0.47
CDH6P55285 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.98■□□□□ 0.47
CDH6P55285 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.98■□□□□ 0.47
CDH6P55285 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.98■□□□□ 0.47
CDH6P55285 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.98■□□□□ 0.47
CDH6P55285 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDH6P55285 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.98■□□□□ 0.47
CDH6P55285 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH6P55285 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH6P55285 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDH6P55285 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDH6P55285 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH6P55285 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH6P55285 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH6P55285 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH6P55285 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.97■□□□□ 0.47
CDH6P55285 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CDH6P55285 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDH6P55285 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH6P55285 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDH6P55285 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.97■□□□□ 0.47
CDH6P55285 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH6P55285 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH6P55285 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH6P55285 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.97■□□□□ 0.47
CDH6P55285 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.97■□□□□ 0.47
CDH6P55285 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.97■□□□□ 0.47
CDH6P55285 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.97■□□□□ 0.47
CDH6P55285 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDH6P55285 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.97■□□□□ 0.47
CDH6P55285 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CDH6P55285 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.97■□□□□ 0.47
CDH6P55285 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH6P55285 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDH6P55285 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH6P55285 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH6P55285 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CDH6P55285 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CDH6P55285 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
CDH6P55285 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CDH6P55285 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
CDH6P55285 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH6P55285 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.97■□□□□ 0.47
CDH6P55285 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH6P55285 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDH6P55285 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH6P55285 EGFEM1P-202ENST00000431685 1563 ntBASIC17.96■□□□□ 0.47
CDH6P55285 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH6P55285 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDH6P55285 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDH6P55285 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH6P55285 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH6P55285 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH6P55285 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH6P55285 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.96■□□□□ 0.47
CDH6P55285 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.96■□□□□ 0.47
CDH6P55285 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.96■□□□□ 0.47
CDH6P55285 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH6P55285 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH6P55285 SPDYE21P-201ENST00000413323 827 ntBASIC17.96■□□□□ 0.47
CDH6P55285 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.96■□□□□ 0.47
CDH6P55285 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.96■□□□□ 0.47
CDH6P55285 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
CDH6P55285 SIGLEC30P-201ENST00000455569 941 ntBASIC17.96■□□□□ 0.47
CDH6P55285 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.96■□□□□ 0.47
CDH6P55285 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CDH6P55285 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH6P55285 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH6P55285 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CDH6P55285 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDH6P55285 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH6P55285 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDH6P55285 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CDH6P55285 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CDH6P55285 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDH6P55285 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms