Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
CPT1AP50416 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
CPT1AP50416 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CPT1AP50416 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.02■□□□□ 0.63
CPT1AP50416 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CPT1AP50416 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPT1AP50416 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CPT1AP50416 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPT1AP50416 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPT1AP50416 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.01■□□□□ 0.63
CPT1AP50416 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPT1AP50416 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CPT1AP50416 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC19.01■□□□□ 0.63
CPT1AP50416 AC012569.1-201ENST00000591191 1524 ntBASIC19.01■□□□□ 0.63
CPT1AP50416 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
CPT1AP50416 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CPT1AP50416 HMGA1P7-201ENST00000406908 502 ntBASIC19.01■□□□□ 0.63
CPT1AP50416 AC069335.1-201ENST00000489972 472 ntBASIC19.01■□□□□ 0.63
CPT1AP50416 DUT-210ENST00000559935 569 ntTSL 3 BASIC19.01■□□□□ 0.63
CPT1AP50416 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC19.01■□□□□ 0.63
CPT1AP50416 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPT1AP50416 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPT1AP50416 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPT1AP50416 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPT1AP50416 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CPT1AP50416 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CPT1AP50416 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC19.01■□□□□ 0.63
CPT1AP50416 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.01■□□□□ 0.63
CPT1AP50416 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC19.01■□□□□ 0.63
CPT1AP50416 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPT1AP50416 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.01■□□□□ 0.63
CPT1AP50416 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPT1AP50416 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
CPT1AP50416 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC19■□□□□ 0.63
CPT1AP50416 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CPT1AP50416 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CPT1AP50416 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CPT1AP50416 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC19■□□□□ 0.63
CPT1AP50416 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CPT1AP50416 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC19■□□□□ 0.63
CPT1AP50416 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC19■□□□□ 0.63
CPT1AP50416 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
CPT1AP50416 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC19■□□□□ 0.63
CPT1AP50416 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC19■□□□□ 0.63
CPT1AP50416 VPS29-207ENST00000549970 818 ntTSL 3 BASIC19■□□□□ 0.63
CPT1AP50416 DUX4L17-201ENST00000557360 1267 ntBASIC19■□□□□ 0.63
CPT1AP50416 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CPT1AP50416 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CPT1AP50416 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC19■□□□□ 0.63
CPT1AP50416 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19■□□□□ 0.63
CPT1AP50416 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CPT1AP50416 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19■□□□□ 0.63
CPT1AP50416 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
CPT1AP50416 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CPT1AP50416 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CPT1AP50416 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CPT1AP50416 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CPT1AP50416 AL035633.1-201ENST00000406139 838 ntBASIC18.99■□□□□ 0.63
CPT1AP50416 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CPT1AP50416 SLC25A6P5-201ENST00000435663 894 ntBASIC18.99■□□□□ 0.63
CPT1AP50416 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC18.99■□□□□ 0.63
CPT1AP50416 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC18.99■□□□□ 0.63
CPT1AP50416 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC18.99■□□□□ 0.63
CPT1AP50416 RNA5SP421-201ENST00000516864 134 ntBASIC18.99■□□□□ 0.63
CPT1AP50416 AL512356.2-201ENST00000546955 174 ntBASIC18.99■□□□□ 0.63
CPT1AP50416 GREM1-201ENST00000560677 623 ntTSL 4 BASIC18.99■□□□□ 0.63
CPT1AP50416 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC18.99■□□□□ 0.63
CPT1AP50416 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC18.99■□□□□ 0.63
CPT1AP50416 AL009183.1-201ENST00000603760 355 ntBASIC18.99■□□□□ 0.63
CPT1AP50416 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.99■□□□□ 0.63
CPT1AP50416 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.99■□□□□ 0.63
CPT1AP50416 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CPT1AP50416 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CPT1AP50416 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
CPT1AP50416 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.99■□□□□ 0.63
CPT1AP50416 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CPT1AP50416 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CPT1AP50416 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CPT1AP50416 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
CPT1AP50416 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CPT1AP50416 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CPT1AP50416 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC18.98■□□□□ 0.63
CPT1AP50416 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CPT1AP50416 AL353732.1-201ENST00000569618 1459 ntBASIC18.98■□□□□ 0.63
CPT1AP50416 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CPT1AP50416 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CPT1AP50416 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.98■□□□□ 0.63
CPT1AP50416 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CPT1AP50416 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CPT1AP50416 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CPT1AP50416 PTMS-202ENST00000389462 773 ntTSL 2 BASIC18.98■□□□□ 0.63
CPT1AP50416 RPL30-202ENST00000396070 440 ntTSL 2 BASIC18.98■□□□□ 0.63
CPT1AP50416 AC092474.2-201ENST00000424288 719 ntBASIC18.98■□□□□ 0.63
CPT1AP50416 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC18.98■□□□□ 0.63
CPT1AP50416 LHX6-205ENST00000464484 666 ntTSL 2 BASIC18.98■□□□□ 0.63
CPT1AP50416 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CPT1AP50416 IGHV3-62-201ENST00000520057 340 ntBASIC18.98■□□□□ 0.63
CPT1AP50416 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.98■□□□□ 0.63
CPT1AP50416 INO80E-210ENST00000567705 880 ntTSL 3 BASIC18.98■□□□□ 0.63
CPT1AP50416 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms