Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT6CP48668 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.78■□□□□ 0.28
KRT6CP48668 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
KRT6CP48668 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
KRT6CP48668 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
KRT6CP48668 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
KRT6CP48668 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT6CP48668 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT6CP48668 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT6CP48668 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT6CP48668 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT6CP48668 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT6CP48668 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT6CP48668 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT6CP48668 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KRT6CP48668 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.78■□□□□ 0.28
KRT6CP48668 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KRT6CP48668 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KRT6CP48668 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.78■□□□□ 0.28
KRT6CP48668 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.78■□□□□ 0.28
KRT6CP48668 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.78■□□□□ 0.28
KRT6CP48668 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
KRT6CP48668 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT6CP48668 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT6CP48668 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.78■□□□□ 0.28
KRT6CP48668 AC060834.1-201ENST00000443027 2032 ntBASIC16.78■□□□□ 0.28
KRT6CP48668 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.78■□□□□ 0.28
KRT6CP48668 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT6CP48668 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KRT6CP48668 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.78■□□□□ 0.28
KRT6CP48668 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.78■□□□□ 0.28
KRT6CP48668 AC011676.5-201ENST00000624864 2660 ntBASIC16.78■□□□□ 0.28
KRT6CP48668 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT6CP48668 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.78■□□□□ 0.28
KRT6CP48668 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT6CP48668 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT6CP48668 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
KRT6CP48668 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KRT6CP48668 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.77■□□□□ 0.28
KRT6CP48668 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KRT6CP48668 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KRT6CP48668 AC016734.2-201ENST00000624325 1377 ntBASIC16.77■□□□□ 0.28
KRT6CP48668 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
KRT6CP48668 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KRT6CP48668 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KRT6CP48668 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
KRT6CP48668 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.77■□□□□ 0.28
KRT6CP48668 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
KRT6CP48668 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
KRT6CP48668 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.77■□□□□ 0.28
KRT6CP48668 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KRT6CP48668 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
KRT6CP48668 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
KRT6CP48668 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KRT6CP48668 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KRT6CP48668 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
KRT6CP48668 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
KRT6CP48668 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KRT6CP48668 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KRT6CP48668 SLC25A1P3-201ENST00000395415 828 ntBASIC16.77■□□□□ 0.28
KRT6CP48668 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.77■□□□□ 0.28
KRT6CP48668 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
KRT6CP48668 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.77■□□□□ 0.28
KRT6CP48668 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.77■□□□□ 0.28
KRT6CP48668 FAM86EP-206ENST00000510506 987 ntBASIC16.77■□□□□ 0.28
KRT6CP48668 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.77■□□□□ 0.28
KRT6CP48668 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.77■□□□□ 0.28
KRT6CP48668 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
KRT6CP48668 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.77■□□□□ 0.28
KRT6CP48668 AL353593.2-201ENST00000602529 1483 ntBASIC16.77■□□□□ 0.28
KRT6CP48668 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
KRT6CP48668 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.77■□□□□ 0.27
KRT6CP48668 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
KRT6CP48668 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
KRT6CP48668 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.77■□□□□ 0.27
KRT6CP48668 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.77■□□□□ 0.27
KRT6CP48668 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
KRT6CP48668 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KRT6CP48668 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
KRT6CP48668 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
KRT6CP48668 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KRT6CP48668 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
KRT6CP48668 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.76■□□□□ 0.27
KRT6CP48668 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.76■□□□□ 0.27
KRT6CP48668 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
KRT6CP48668 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
KRT6CP48668 AC011467.2-201ENST00000598425 242 ntBASIC16.76■□□□□ 0.27
KRT6CP48668 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
KRT6CP48668 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.76■□□□□ 0.27
KRT6CP48668 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
KRT6CP48668 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
KRT6CP48668 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KRT6CP48668 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.76■□□□□ 0.27
KRT6CP48668 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.76■□□□□ 0.27
KRT6CP48668 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
KRT6CP48668 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
KRT6CP48668 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
KRT6CP48668 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
KRT6CP48668 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
KRT6CP48668 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms