Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.84■□□□□ 0.13
RFC3P40938 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.84■□□□□ 0.13
RFC3P40938 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.84■□□□□ 0.13
RFC3P40938 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.84■□□□□ 0.13
RFC3P40938 AL591424.1-201ENST00000442569 1213 ntBASIC15.84■□□□□ 0.13
RFC3P40938 RNA5SP416-201ENST00000516838 111 ntBASIC15.84■□□□□ 0.13
RFC3P40938 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.84■□□□□ 0.13
RFC3P40938 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.84■□□□□ 0.13
RFC3P40938 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.84■□□□□ 0.13
RFC3P40938 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.84■□□□□ 0.13
RFC3P40938 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.84■□□□□ 0.13
RFC3P40938 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.84■□□□□ 0.13
RFC3P40938 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFC3P40938 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.84■□□□□ 0.13
RFC3P40938 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
RFC3P40938 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFC3P40938 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFC3P40938 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.84■□□□□ 0.13
RFC3P40938 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.84■□□□□ 0.13
RFC3P40938 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
RFC3P40938 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.84■□□□□ 0.13
RFC3P40938 AL354751.1-201ENST00000412768 1863 ntBASIC15.84■□□□□ 0.13
RFC3P40938 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFC3P40938 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFC3P40938 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFC3P40938 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFC3P40938 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC15.84■□□□□ 0.13
RFC3P40938 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
RFC3P40938 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
RFC3P40938 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.83■□□□□ 0.13
RFC3P40938 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC15.83■□□□□ 0.13
RFC3P40938 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
RFC3P40938 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
RFC3P40938 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC15.83■□□□□ 0.13
RFC3P40938 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.83■□□□□ 0.13
RFC3P40938 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
RFC3P40938 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RFC3P40938 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RFC3P40938 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
RFC3P40938 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RFC3P40938 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RFC3P40938 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RFC3P40938 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RFC3P40938 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RFC3P40938 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RFC3P40938 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RFC3P40938 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.83■□□□□ 0.12
RFC3P40938 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.83■□□□□ 0.12
RFC3P40938 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
RFC3P40938 AC002558.1-201ENST00000488906 803 ntBASIC15.83■□□□□ 0.12
RFC3P40938 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.83■□□□□ 0.12
RFC3P40938 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.83■□□□□ 0.12
RFC3P40938 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.83■□□□□ 0.12
RFC3P40938 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RFC3P40938 MIR4751-201ENST00000578027 74 ntBASIC15.83■□□□□ 0.12
RFC3P40938 AC010327.4-202ENST00000591484 748 ntBASIC15.83■□□□□ 0.12
RFC3P40938 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.83■□□□□ 0.12
RFC3P40938 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
RFC3P40938 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RFC3P40938 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.83■□□□□ 0.12
RFC3P40938 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RFC3P40938 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RFC3P40938 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
RFC3P40938 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RFC3P40938 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.83■□□□□ 0.12
RFC3P40938 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
RFC3P40938 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RFC3P40938 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC15.83■□□□□ 0.12
RFC3P40938 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RFC3P40938 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.83■□□□□ 0.12
RFC3P40938 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RFC3P40938 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RFC3P40938 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
RFC3P40938 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RFC3P40938 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RFC3P40938 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RFC3P40938 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFC3P40938 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
RFC3P40938 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.82■□□□□ 0.12
RFC3P40938 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
RFC3P40938 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
RFC3P40938 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFC3P40938 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFC3P40938 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC15.82■□□□□ 0.12
RFC3P40938 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFC3P40938 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFC3P40938 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFC3P40938 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
RFC3P40938 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.82■□□□□ 0.12
RFC3P40938 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.82■□□□□ 0.12
RFC3P40938 AC108073.2-201ENST00000464002 357 ntBASIC15.82■□□□□ 0.12
RFC3P40938 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.82■□□□□ 0.12
RFC3P40938 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.82■□□□□ 0.12
RFC3P40938 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.82■□□□□ 0.12
RFC3P40938 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.82■□□□□ 0.12
RFC3P40938 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.82■□□□□ 0.12
RFC3P40938 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.82■□□□□ 0.12
RFC3P40938 AC064836.3-201ENST00000607928 673 ntBASIC15.82■□□□□ 0.12
RFC3P40938 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.82■□□□□ 0.12
RFC3P40938 PGM5P2-202ENST00000637225 1043 ntBASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms