Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHMP24386 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CHMP24386 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHMP24386 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHMP24386 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CHMP24386 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHMP24386 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.18■□□□□ 0.18
CHMP24386 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHMP24386 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHMP24386 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.18■□□□□ 0.18
CHMP24386 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CHMP24386 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHMP24386 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CHMP24386 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHMP24386 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHMP24386 DDX43P3-201ENST00000441064 443 ntBASIC16.18■□□□□ 0.18
CHMP24386 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.18■□□□□ 0.18
CHMP24386 AC091607.1-201ENST00000490318 1060 ntBASIC16.18■□□□□ 0.18
CHMP24386 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHMP24386 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.18■□□□□ 0.18
CHMP24386 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.18■□□□□ 0.18
CHMP24386 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.18■□□□□ 0.18
CHMP24386 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.18■□□□□ 0.18
CHMP24386 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.18■□□□□ 0.18
CHMP24386 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHMP24386 AC012313.10-201ENST00000623509 926 ntBASIC16.18■□□□□ 0.18
CHMP24386 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHMP24386 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.18■□□□□ 0.18
CHMP24386 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHMP24386 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.18■□□□□ 0.18
CHMP24386 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHMP24386 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHMP24386 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.18■□□□□ 0.18
CHMP24386 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHMP24386 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHMP24386 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
CHMP24386 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CHMP24386 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHMP24386 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHMP24386 AC105020.1-201ENST00000435356 2205 ntBASIC16.18■□□□□ 0.18
CHMP24386 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHMP24386 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHMP24386 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.18■□□□□ 0.18
CHMP24386 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHMP24386 AC060834.1-201ENST00000443027 2032 ntBASIC16.18■□□□□ 0.18
CHMP24386 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.18■□□□□ 0.18
CHMP24386 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHMP24386 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.17■□□□□ 0.18
CHMP24386 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHMP24386 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CHMP24386 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.17■□□□□ 0.18
CHMP24386 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHMP24386 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CHMP24386 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHMP24386 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CHMP24386 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHMP24386 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHMP24386 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CHMP24386 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.17■□□□□ 0.18
CHMP24386 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHMP24386 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHMP24386 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.17■□□□□ 0.18
CHMP24386 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHMP24386 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHMP24386 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHMP24386 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.17■□□□□ 0.18
CHMP24386 TSPY19P-201ENST00000418461 509 ntBASIC16.17■□□□□ 0.18
CHMP24386 TSPY18P-201ENST00000441642 509 ntBASIC16.17■□□□□ 0.18
CHMP24386 KRT16P4-201ENST00000453883 522 ntBASIC16.17■□□□□ 0.18
CHMP24386 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHMP24386 FOSL1P1-201ENST00000511041 816 ntBASIC16.17■□□□□ 0.18
CHMP24386 AC009533.2-201ENST00000543664 586 ntBASIC16.17■□□□□ 0.18
CHMP24386 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.17■□□□□ 0.18
CHMP24386 AC005336.2-201ENST00000593183 939 ntBASIC16.17■□□□□ 0.18
CHMP24386 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHMP24386 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.17■□□□□ 0.18
CHMP24386 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.17■□□□□ 0.18
CHMP24386 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CHMP24386 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CHMP24386 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.17■□□□□ 0.18
CHMP24386 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.17■□□□□ 0.18
CHMP24386 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CHMP24386 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHMP24386 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHMP24386 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHMP24386 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHMP24386 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHMP24386 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHMP24386 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHMP24386 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHMP24386 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHMP24386 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CHMP24386 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHMP24386 PCDHB19P-201ENST00000570871 2371 ntBASIC16.16■□□□□ 0.18
CHMP24386 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHMP24386 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHMP24386 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.16■□□□□ 0.18
CHMP24386 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.16■□□□□ 0.18
CHMP24386 PCDHA14-201ENST00000506751 2298 ntBASIC16.16■□□□□ 0.18
CHMP24386 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms