Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC18.48■□□□□ 0.55
TIMP1P01033 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
TIMP1P01033 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC18.48■□□□□ 0.55
TIMP1P01033 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC18.48■□□□□ 0.55
TIMP1P01033 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TIMP1P01033 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.48■□□□□ 0.55
TIMP1P01033 CDK4-206ENST00000549606 558 ntTSL 2 BASIC18.48■□□□□ 0.55
TIMP1P01033 MPI-209ENST00000564003 1195 ntTSL 2 BASIC18.48■□□□□ 0.55
TIMP1P01033 TP53TG3HP-202ENST00000569755 579 ntBASIC18.48■□□□□ 0.55
TIMP1P01033 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
TIMP1P01033 LINC01451-201ENST00000623792 534 ntBASIC18.48■□□□□ 0.55
TIMP1P01033 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC18.48■□□□□ 0.55
TIMP1P01033 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
TIMP1P01033 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
TIMP1P01033 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
TIMP1P01033 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TIMP1P01033 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TIMP1P01033 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TIMP1P01033 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.48■□□□□ 0.55
TIMP1P01033 FLJ13224-201ENST00000313737 1514 ntBASIC18.48■□□□□ 0.55
TIMP1P01033 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC18.48■□□□□ 0.55
TIMP1P01033 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TIMP1P01033 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
TIMP1P01033 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TIMP1P01033 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.47■□□□□ 0.55
TIMP1P01033 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.47■□□□□ 0.55
TIMP1P01033 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
TIMP1P01033 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TIMP1P01033 PTPA-220ENST00000436883 532 ntTSL 4 BASIC18.47■□□□□ 0.55
TIMP1P01033 GPR53P-205ENST00000457298 1084 ntBASIC18.47■□□□□ 0.55
TIMP1P01033 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC18.47■□□□□ 0.55
TIMP1P01033 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC18.47■□□□□ 0.55
TIMP1P01033 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.47■□□□□ 0.55
TIMP1P01033 AL138918.1-201ENST00000568306 659 ntBASIC18.47■□□□□ 0.55
TIMP1P01033 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC18.47■□□□□ 0.55
TIMP1P01033 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC18.47■□□□□ 0.55
TIMP1P01033 AC003101.2-201ENST00000612557 442 ntBASIC18.47■□□□□ 0.55
TIMP1P01033 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.47■□□□□ 0.55
TIMP1P01033 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC18.47■□□□□ 0.55
TIMP1P01033 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TIMP1P01033 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TIMP1P01033 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.47■□□□□ 0.55
TIMP1P01033 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TIMP1P01033 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TIMP1P01033 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TIMP1P01033 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TIMP1P01033 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TIMP1P01033 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TIMP1P01033 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.46■□□□□ 0.55
TIMP1P01033 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.46■□□□□ 0.55
TIMP1P01033 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
TIMP1P01033 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TIMP1P01033 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TIMP1P01033 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TIMP1P01033 SLC25A24-204ENST00000569674 2357 ntBASIC18.46■□□□□ 0.55
TIMP1P01033 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.46■□□□□ 0.55
TIMP1P01033 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.46■□□□□ 0.55
TIMP1P01033 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TIMP1P01033 TMPRSS11CP-201ENST00000453277 683 ntBASIC18.46■□□□□ 0.55
TIMP1P01033 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.46■□□□□ 0.55
TIMP1P01033 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TIMP1P01033 IGHV3-71-201ENST00000523324 359 ntBASIC18.46■□□□□ 0.55
TIMP1P01033 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC18.46■□□□□ 0.55
TIMP1P01033 RARRES2P9-201ENST00000565168 469 ntBASIC18.46■□□□□ 0.55
TIMP1P01033 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC18.46■□□□□ 0.55
TIMP1P01033 AC007967.4-201ENST00000614700 386 ntBASIC18.46■□□□□ 0.55
TIMP1P01033 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TIMP1P01033 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.46■□□□□ 0.55
TIMP1P01033 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
TIMP1P01033 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TIMP1P01033 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.46■□□□□ 0.55
TIMP1P01033 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TIMP1P01033 AC016027.1-202ENST00000607927 1699 ntBASIC18.46■□□□□ 0.55
TIMP1P01033 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TIMP1P01033 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
TIMP1P01033 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.45■□□□□ 0.54
TIMP1P01033 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TIMP1P01033 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.45■□□□□ 0.54
TIMP1P01033 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.45■□□□□ 0.54
TIMP1P01033 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TIMP1P01033 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC18.45■□□□□ 0.54
TIMP1P01033 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TIMP1P01033 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TIMP1P01033 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TIMP1P01033 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TIMP1P01033 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TIMP1P01033 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TIMP1P01033 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC18.45■□□□□ 0.54
TIMP1P01033 HLA-V-204ENST00000476601 1289 ntBASIC18.45■□□□□ 0.54
TIMP1P01033 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC18.45■□□□□ 0.54
TIMP1P01033 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC18.45■□□□□ 0.54
TIMP1P01033 GPER1-207ENST00000619052 571 ntTSL 2 BASIC18.45■□□□□ 0.54
TIMP1P01033 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TIMP1P01033 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TIMP1P01033 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TIMP1P01033 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TIMP1P01033 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TIMP1P01033 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.45■□□□□ 0.54
TIMP1P01033 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TIMP1P01033 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms