Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.69■□□□□ 0.26
SLC28A2O43868 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.69■□□□□ 0.26
SLC28A2O43868 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC28A2O43868 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.69■□□□□ 0.26
SLC28A2O43868 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.69■□□□□ 0.26
SLC28A2O43868 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.69■□□□□ 0.26
SLC28A2O43868 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC28A2O43868 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SLC28A2O43868 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.68■□□□□ 0.26
SLC28A2O43868 AL645608.8-201ENST00000606034 2086 ntBASIC16.68■□□□□ 0.26
SLC28A2O43868 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC28A2O43868 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC28A2O43868 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC28A2O43868 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC28A2O43868 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.68■□□□□ 0.26
SLC28A2O43868 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SLC28A2O43868 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC28A2O43868 RNA5SP415-201ENST00000517246 115 ntBASIC16.68■□□□□ 0.26
SLC28A2O43868 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.68■□□□□ 0.26
SLC28A2O43868 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.68■□□□□ 0.26
SLC28A2O43868 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.68■□□□□ 0.26
SLC28A2O43868 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.68■□□□□ 0.26
SLC28A2O43868 MTDHP5-201ENST00000598980 586 ntBASIC16.68■□□□□ 0.26
SLC28A2O43868 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.68■□□□□ 0.26
SLC28A2O43868 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
SLC28A2O43868 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC28A2O43868 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.68■□□□□ 0.26
SLC28A2O43868 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC28A2O43868 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC28A2O43868 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC28A2O43868 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.68■□□□□ 0.26
SLC28A2O43868 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
SLC28A2O43868 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.68■□□□□ 0.26
SLC28A2O43868 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC28A2O43868 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SLC28A2O43868 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.68■□□□□ 0.26
SLC28A2O43868 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SLC28A2O43868 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
SLC28A2O43868 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.68■□□□□ 0.26
SLC28A2O43868 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC28A2O43868 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC28A2O43868 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SLC28A2O43868 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SLC28A2O43868 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.67■□□□□ 0.26
SLC28A2O43868 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC28A2O43868 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC28A2O43868 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.67■□□□□ 0.26
SLC28A2O43868 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SLC28A2O43868 AC133963.1-201ENST00000504166 1679 ntBASIC16.67■□□□□ 0.26
SLC28A2O43868 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SLC28A2O43868 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC28A2O43868 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC28A2O43868 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC28A2O43868 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SLC28A2O43868 COX20P2-201ENST00000452636 358 ntBASIC16.67■□□□□ 0.26
SLC28A2O43868 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.67■□□□□ 0.26
SLC28A2O43868 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.67■□□□□ 0.26
SLC28A2O43868 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.67■□□□□ 0.26
SLC28A2O43868 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.67■□□□□ 0.26
SLC28A2O43868 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.67■□□□□ 0.26
SLC28A2O43868 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SLC28A2O43868 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC28A2O43868 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.67■□□□□ 0.26
SLC28A2O43868 AP001269.4-201ENST00000609611 512 ntBASIC16.67■□□□□ 0.26
SLC28A2O43868 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.67■□□□□ 0.26
SLC28A2O43868 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SLC28A2O43868 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC28A2O43868 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC28A2O43868 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC28A2O43868 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.67■□□□□ 0.26
SLC28A2O43868 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SLC28A2O43868 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SLC28A2O43868 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SLC28A2O43868 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC28A2O43868 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.66■□□□□ 0.26
SLC28A2O43868 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SLC28A2O43868 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC28A2O43868 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC28A2O43868 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SLC28A2O43868 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.66■□□□□ 0.26
SLC28A2O43868 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.66■□□□□ 0.26
SLC28A2O43868 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SLC28A2O43868 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC28A2O43868 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC28A2O43868 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SLC28A2O43868 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
SLC28A2O43868 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC28A2O43868 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.66■□□□□ 0.26
SLC28A2O43868 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.66■□□□□ 0.26
SLC28A2O43868 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.66■□□□□ 0.26
SLC28A2O43868 RPS2P1-201ENST00000434010 821 ntBASIC16.66■□□□□ 0.26
SLC28A2O43868 KRT18P65-201ENST00000439811 1286 ntBASIC16.66■□□□□ 0.26
SLC28A2O43868 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC28A2O43868 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
SLC28A2O43868 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.66■□□□□ 0.26
SLC28A2O43868 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.66■□□□□ 0.26
SLC28A2O43868 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.66■□□□□ 0.26
SLC28A2O43868 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.66■□□□□ 0.26
SLC28A2O43868 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.66■□□□□ 0.26
SLC28A2O43868 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms