Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
MID1O15344 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
MID1O15344 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
MID1O15344 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
MID1O15344 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
MID1O15344 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
MID1O15344 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
MID1O15344 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
MID1O15344 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
MID1O15344 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
MID1O15344 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
MID1O15344 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
MID1O15344 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MID1O15344 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
MID1O15344 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MID1O15344 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.26■□□□□ 0.35
MID1O15344 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MID1O15344 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MID1O15344 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MID1O15344 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.26■□□□□ 0.35
MID1O15344 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MID1O15344 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MID1O15344 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
MID1O15344 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
MID1O15344 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MID1O15344 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MID1O15344 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MID1O15344 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MID1O15344 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.26■□□□□ 0.35
MID1O15344 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.26■□□□□ 0.35
MID1O15344 AP006288.1-201ENST00000446065 395 ntBASIC17.26■□□□□ 0.35
MID1O15344 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MID1O15344 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.26■□□□□ 0.35
MID1O15344 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.26■□□□□ 0.35
MID1O15344 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MID1O15344 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.26■□□□□ 0.35
MID1O15344 AC007064.4-201ENST00000637740 555 ntBASIC17.26■□□□□ 0.35
MID1O15344 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
MID1O15344 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MID1O15344 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.26■□□□□ 0.35
MID1O15344 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
MID1O15344 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
MID1O15344 AC133963.1-201ENST00000504166 1679 ntBASIC17.26■□□□□ 0.35
MID1O15344 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
MID1O15344 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MID1O15344 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MID1O15344 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MID1O15344 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.25■□□□□ 0.35
MID1O15344 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
MID1O15344 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
MID1O15344 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
MID1O15344 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.25■□□□□ 0.35
MID1O15344 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MID1O15344 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
MID1O15344 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
MID1O15344 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.25■□□□□ 0.35
MID1O15344 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.25■□□□□ 0.35
MID1O15344 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.25■□□□□ 0.35
MID1O15344 AC087163.2-201ENST00000457299 853 ntBASIC17.25■□□□□ 0.35
MID1O15344 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
MID1O15344 SLC25A6P2-201ENST00000497974 877 ntBASIC17.25■□□□□ 0.35
MID1O15344 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.25■□□□□ 0.35
MID1O15344 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
MID1O15344 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
MID1O15344 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MID1O15344 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.25■□□□□ 0.35
MID1O15344 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
MID1O15344 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MID1O15344 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
MID1O15344 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MID1O15344 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
MID1O15344 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
MID1O15344 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MID1O15344 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
MID1O15344 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MID1O15344 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
MID1O15344 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
MID1O15344 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
MID1O15344 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.24■□□□□ 0.35
MID1O15344 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.24■□□□□ 0.35
MID1O15344 MKNK2P1-201ENST00000437526 628 ntBASIC17.24■□□□□ 0.35
MID1O15344 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.24■□□□□ 0.35
MID1O15344 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.24■□□□□ 0.35
MID1O15344 AC074386.1-202ENST00000463561 864 ntBASIC17.24■□□□□ 0.35
MID1O15344 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.24■□□□□ 0.35
MID1O15344 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.24■□□□□ 0.35
MID1O15344 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.24■□□□□ 0.35
MID1O15344 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MID1O15344 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MID1O15344 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
MID1O15344 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MID1O15344 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MID1O15344 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
MID1O15344 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
MID1O15344 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
MID1O15344 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.23■□□□□ 0.35
MID1O15344 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
MID1O15344 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.23■□□□□ 0.35
MID1O15344 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.23■□□□□ 0.35
MID1O15344 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms