Protein–RNA interactions for Protein: O15255

RTL8C, CAAX box protein 1, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8CO15255 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RTL8CO15255 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RTL8CO15255 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RTL8CO15255 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC11.48□□□□□ -0.57
RTL8CO15255 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RTL8CO15255 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC11.48□□□□□ -0.57
RTL8CO15255 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RTL8CO15255 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RTL8CO15255 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC11.48□□□□□ -0.57
RTL8CO15255 AC009949.1-201ENST00000623048 1830 ntBASIC11.48□□□□□ -0.57
RTL8CO15255 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RTL8CO15255 FLYWCH1P1-201ENST00000460917 1874 ntBASIC11.48□□□□□ -0.57
RTL8CO15255 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
RTL8CO15255 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RTL8CO15255 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RTL8CO15255 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
RTL8CO15255 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RTL8CO15255 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC11.48□□□□□ -0.57
RTL8CO15255 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RTL8CO15255 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC11.48□□□□□ -0.57
RTL8CO15255 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
RTL8CO15255 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RTL8CO15255 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
RTL8CO15255 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
RTL8CO15255 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
RTL8CO15255 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RTL8CO15255 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RTL8CO15255 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC11.47□□□□□ -0.57
RTL8CO15255 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC11.47□□□□□ -0.57
RTL8CO15255 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
RTL8CO15255 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC11.47□□□□□ -0.57
RTL8CO15255 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC11.47□□□□□ -0.57
RTL8CO15255 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
RTL8CO15255 POR-209ENST00000439269 1858 ntTSL 2 BASIC11.47□□□□□ -0.57
RTL8CO15255 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC11.47□□□□□ -0.57
RTL8CO15255 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
RTL8CO15255 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC11.47□□□□□ -0.57
RTL8CO15255 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC11.47□□□□□ -0.57
RTL8CO15255 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC11.47□□□□□ -0.57
RTL8CO15255 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
RTL8CO15255 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
RTL8CO15255 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RTL8CO15255 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RTL8CO15255 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
RTL8CO15255 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
RTL8CO15255 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RTL8CO15255 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
RTL8CO15255 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
RTL8CO15255 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
RTL8CO15255 METTL26-204ENST00000397665 558 ntTSL 2 BASIC11.47□□□□□ -0.57
RTL8CO15255 AC236430.1-201ENST00000402231 743 ntBASIC11.47□□□□□ -0.57
RTL8CO15255 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
RTL8CO15255 NABP1-203ENST00000409510 843 ntTSL 5 BASIC11.47□□□□□ -0.57
RTL8CO15255 ACTG1P4-201ENST00000425123 1122 ntBASIC11.47□□□□□ -0.57
RTL8CO15255 AL671277.1-201ENST00000429656 993 ntBASIC11.47□□□□□ -0.57
RTL8CO15255 AC055876.3-201ENST00000431496 288 ntBASIC11.47□□□□□ -0.57
RTL8CO15255 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC11.47□□□□□ -0.57
RTL8CO15255 CNN2P2-201ENST00000443536 909 ntBASIC11.47□□□□□ -0.57
RTL8CO15255 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC11.47□□□□□ -0.57
RTL8CO15255 CNN2P3-201ENST00000450201 906 ntBASIC11.47□□□□□ -0.57
RTL8CO15255 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC11.47□□□□□ -0.57
RTL8CO15255 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC11.47□□□□□ -0.57
RTL8CO15255 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC11.47□□□□□ -0.57
RTL8CO15255 AC138649.4-201ENST00000612222 287 ntBASIC11.47□□□□□ -0.57
RTL8CO15255 AL136317.3-201ENST00000618497 906 ntBASIC11.47□□□□□ -0.57
RTL8CO15255 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RTL8CO15255 AC087289.5-201ENST00000586076 3175 ntBASIC11.47□□□□□ -0.57
RTL8CO15255 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RTL8CO15255 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RTL8CO15255 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
RTL8CO15255 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
RTL8CO15255 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
RTL8CO15255 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
RTL8CO15255 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RTL8CO15255 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RTL8CO15255 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC11.47□□□□□ -0.57
RTL8CO15255 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RTL8CO15255 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RTL8CO15255 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
RTL8CO15255 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC11.46□□□□□ -0.57
RTL8CO15255 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
RTL8CO15255 EFTUD1P1-204ENST00000560401 1798 ntBASIC11.46□□□□□ -0.57
RTL8CO15255 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC11.46□□□□□ -0.57
RTL8CO15255 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
RTL8CO15255 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
RTL8CO15255 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC11.46□□□□□ -0.57
RTL8CO15255 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
RTL8CO15255 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
RTL8CO15255 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
RTL8CO15255 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC11.46□□□□□ -0.57
RTL8CO15255 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
RTL8CO15255 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
RTL8CO15255 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC11.46□□□□□ -0.57
RTL8CO15255 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
RTL8CO15255 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC11.46□□□□□ -0.57
RTL8CO15255 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
RTL8CO15255 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
RTL8CO15255 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
RTL8CO15255 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
RTL8CO15255 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 10.2 ms