Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
CHKB-CPT1BH3BT56 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
CHKB-CPT1BH3BT56 ARHGEF10-205ENST00000518288 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
CHKB-CPT1BH3BT56 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC9.58□□□□□ -0.88
CHKB-CPT1BH3BT56 AC087633.2-202ENST00000565166 1439 ntBASIC9.58□□□□□ -0.88
CHKB-CPT1BH3BT56 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC9.58□□□□□ -0.88
CHKB-CPT1BH3BT56 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC9.58□□□□□ -0.88
CHKB-CPT1BH3BT56 AC135012.1-201ENST00000563931 7430 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
CHKB-CPT1BH3BT56 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC9.58□□□□□ -0.88
CHKB-CPT1BH3BT56 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC9.58□□□□□ -0.88
CHKB-CPT1BH3BT56 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
CHKB-CPT1BH3BT56 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
CHKB-CPT1BH3BT56 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
CHKB-CPT1BH3BT56 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC9.58□□□□□ -0.88
CHKB-CPT1BH3BT56 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
CHKB-CPT1BH3BT56 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC9.58□□□□□ -0.88
CHKB-CPT1BH3BT56 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
CHKB-CPT1BH3BT56 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC9.58□□□□□ -0.88
CHKB-CPT1BH3BT56 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
CHKB-CPT1BH3BT56 LSM4-201ENST00000252816 986 ntTSL 2 BASIC9.58□□□□□ -0.88
CHKB-CPT1BH3BT56 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
CHKB-CPT1BH3BT56 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
CHKB-CPT1BH3BT56 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC9.58□□□□□ -0.88
CHKB-CPT1BH3BT56 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
CHKB-CPT1BH3BT56 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC9.58□□□□□ -0.88
CHKB-CPT1BH3BT56 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
CHKB-CPT1BH3BT56 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
CHKB-CPT1BH3BT56 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
CHKB-CPT1BH3BT56 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC9.58□□□□□ -0.88
CHKB-CPT1BH3BT56 MIR6724-1-201ENST00000616420 92 ntBASIC9.58□□□□□ -0.88
CHKB-CPT1BH3BT56 MIR6724-2-201ENST00000616483 92 ntBASIC9.58□□□□□ -0.88
CHKB-CPT1BH3BT56 MIR6724-4-201ENST00000617390 92 ntBASIC9.58□□□□□ -0.88
CHKB-CPT1BH3BT56 MIR6724-3-201ENST00000622482 92 ntBASIC9.58□□□□□ -0.88
CHKB-CPT1BH3BT56 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC9.58□□□□□ -0.88
CHKB-CPT1BH3BT56 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
CHKB-CPT1BH3BT56 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
CHKB-CPT1BH3BT56 RALGPS1-201ENST00000259351 6336 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
CHKB-CPT1BH3BT56 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
CHKB-CPT1BH3BT56 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC9.58□□□□□ -0.88
CHKB-CPT1BH3BT56 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
CHKB-CPT1BH3BT56 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
CHKB-CPT1BH3BT56 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
CHKB-CPT1BH3BT56 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC9.58□□□□□ -0.88
CHKB-CPT1BH3BT56 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
CHKB-CPT1BH3BT56 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
CHKB-CPT1BH3BT56 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC9.58□□□□□ -0.88
CHKB-CPT1BH3BT56 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
CHKB-CPT1BH3BT56 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC9.58□□□□□ -0.88
CHKB-CPT1BH3BT56 SDHAP1-207ENST00000440850 2000 ntBASIC9.58□□□□□ -0.88
CHKB-CPT1BH3BT56 CACNA1F-202ENST00000376251 5813 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
CHKB-CPT1BH3BT56 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
CHKB-CPT1BH3BT56 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC9.58□□□□□ -0.88
CHKB-CPT1BH3BT56 USP40-201ENST00000251722 5692 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
CHKB-CPT1BH3BT56 CHST6-201ENST00000332272 7957 ntAPPRIS P1 TSL 3 BASIC9.57□□□□□ -0.88
CHKB-CPT1BH3BT56 FES-204ENST00000414248 2327 ntTSL 2 BASIC9.57□□□□□ -0.88
CHKB-CPT1BH3BT56 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
CHKB-CPT1BH3BT56 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
CHKB-CPT1BH3BT56 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
CHKB-CPT1BH3BT56 VWA8-203ENST00000379310 7147 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
CHKB-CPT1BH3BT56 TMEM164-204ENST00000372073 5567 ntAPPRIS P3 TSL 5 BASIC9.57□□□□□ -0.88
CHKB-CPT1BH3BT56 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC9.57□□□□□ -0.88
CHKB-CPT1BH3BT56 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
CHKB-CPT1BH3BT56 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
CHKB-CPT1BH3BT56 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
CHKB-CPT1BH3BT56 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
CHKB-CPT1BH3BT56 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
CHKB-CPT1BH3BT56 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
CHKB-CPT1BH3BT56 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
CHKB-CPT1BH3BT56 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
CHKB-CPT1BH3BT56 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC9.57□□□□□ -0.88
CHKB-CPT1BH3BT56 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC9.57□□□□□ -0.88
CHKB-CPT1BH3BT56 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
CHKB-CPT1BH3BT56 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
CHKB-CPT1BH3BT56 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
CHKB-CPT1BH3BT56 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
CHKB-CPT1BH3BT56 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
CHKB-CPT1BH3BT56 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
CHKB-CPT1BH3BT56 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
CHKB-CPT1BH3BT56 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC9.57□□□□□ -0.88
CHKB-CPT1BH3BT56 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
CHKB-CPT1BH3BT56 MFF-208ENST00000409616 1247 ntTSL 5 BASIC9.57□□□□□ -0.88
CHKB-CPT1BH3BT56 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC9.57□□□□□ -0.88
CHKB-CPT1BH3BT56 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC9.57□□□□□ -0.88
CHKB-CPT1BH3BT56 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC9.57□□□□□ -0.88
CHKB-CPT1BH3BT56 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC9.57□□□□□ -0.88
CHKB-CPT1BH3BT56 AC136469.2-201ENST00000623944 1028 ntBASIC9.57□□□□□ -0.88
CHKB-CPT1BH3BT56 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC9.57□□□□□ -0.88
CHKB-CPT1BH3BT56 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
CHKB-CPT1BH3BT56 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC9.57□□□□□ -0.88
CHKB-CPT1BH3BT56 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC9.57□□□□□ -0.88
CHKB-CPT1BH3BT56 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC9.57□□□□□ -0.88
CHKB-CPT1BH3BT56 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
CHKB-CPT1BH3BT56 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
CHKB-CPT1BH3BT56 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
CHKB-CPT1BH3BT56 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
CHKB-CPT1BH3BT56 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
CHKB-CPT1BH3BT56 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC9.57□□□□□ -0.88
CHKB-CPT1BH3BT56 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
CHKB-CPT1BH3BT56 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
CHKB-CPT1BH3BT56 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms