Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC187A0A096LP49 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CCDC187A0A096LP49 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC187A0A096LP49 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.3■□□□□ 0.2
CCDC187A0A096LP49 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.3■□□□□ 0.2
CCDC187A0A096LP49 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.3■□□□□ 0.2
CCDC187A0A096LP49 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC187A0A096LP49 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC187A0A096LP49 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.3■□□□□ 0.2
CCDC187A0A096LP49 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC187A0A096LP49 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC187A0A096LP49 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC187A0A096LP49 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC187A0A096LP49 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC187A0A096LP49 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC187A0A096LP49 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC187A0A096LP49 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.3■□□□□ 0.2
CCDC187A0A096LP49 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.3■□□□□ 0.2
CCDC187A0A096LP49 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC187A0A096LP49 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC187A0A096LP49 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC187A0A096LP49 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC187A0A096LP49 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC187A0A096LP49 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC187A0A096LP49 PMS2P4-201ENST00000412466 1052 ntBASIC16.3■□□□□ 0.2
CCDC187A0A096LP49 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.3■□□□□ 0.2
CCDC187A0A096LP49 AL592309.1-201ENST00000443127 649 ntBASIC16.3■□□□□ 0.2
CCDC187A0A096LP49 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC16.3■□□□□ 0.2
CCDC187A0A096LP49 KRT8P48-201ENST00000515599 1220 ntBASIC16.3■□□□□ 0.2
CCDC187A0A096LP49 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.3■□□□□ 0.2
CCDC187A0A096LP49 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC187A0A096LP49 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.3■□□□□ 0.2
CCDC187A0A096LP49 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.3■□□□□ 0.2
CCDC187A0A096LP49 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.3■□□□□ 0.2
CCDC187A0A096LP49 AL139327.4-201ENST00000612362 153 ntBASIC16.3■□□□□ 0.2
CCDC187A0A096LP49 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC187A0A096LP49 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.3■□□□□ 0.2
CCDC187A0A096LP49 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC187A0A096LP49 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.3■□□□□ 0.2
CCDC187A0A096LP49 AC009113.1-201ENST00000570267 2443 ntBASIC16.3■□□□□ 0.2
CCDC187A0A096LP49 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC187A0A096LP49 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC187A0A096LP49 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC187A0A096LP49 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC187A0A096LP49 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC187A0A096LP49 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC187A0A096LP49 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.29■□□□□ 0.2
CCDC187A0A096LP49 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC187A0A096LP49 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC187A0A096LP49 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CCDC187A0A096LP49 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC187A0A096LP49 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC187A0A096LP49 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC187A0A096LP49 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC187A0A096LP49 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC187A0A096LP49 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC187A0A096LP49 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC187A0A096LP49 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC187A0A096LP49 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC187A0A096LP49 KRT18P32-201ENST00000424695 1287 ntBASIC16.29■□□□□ 0.2
CCDC187A0A096LP49 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CCDC187A0A096LP49 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.29■□□□□ 0.2
CCDC187A0A096LP49 AC090164.3-201ENST00000610780 2143 ntBASIC16.29■□□□□ 0.2
CCDC187A0A096LP49 AJ011932.1-201ENST00000621707 465 ntBASIC16.29■□□□□ 0.2
CCDC187A0A096LP49 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC187A0A096LP49 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC187A0A096LP49 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC187A0A096LP49 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC187A0A096LP49 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.29■□□□□ 0.2
CCDC187A0A096LP49 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC187A0A096LP49 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC187A0A096LP49 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC187A0A096LP49 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC187A0A096LP49 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC187A0A096LP49 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC187A0A096LP49 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC187A0A096LP49 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC187A0A096LP49 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.28■□□□□ 0.2
CCDC187A0A096LP49 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC187A0A096LP49 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.28■□□□□ 0.2
CCDC187A0A096LP49 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC187A0A096LP49 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CCDC187A0A096LP49 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.28■□□□□ 0.2
CCDC187A0A096LP49 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.28■□□□□ 0.2
CCDC187A0A096LP49 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC187A0A096LP49 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.28■□□□□ 0.2
CCDC187A0A096LP49 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.28■□□□□ 0.2
CCDC187A0A096LP49 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC187A0A096LP49 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC187A0A096LP49 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC187A0A096LP49 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC187A0A096LP49 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC187A0A096LP49 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CCDC187A0A096LP49 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC187A0A096LP49 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC187A0A096LP49 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC187A0A096LP49 TFAMP1-201ENST00000412727 736 ntBASIC16.28■□□□□ 0.2
CCDC187A0A096LP49 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC187A0A096LP49 AC079140.1-201ENST00000508039 487 ntBASIC16.28■□□□□ 0.2
CCDC187A0A096LP49 AC093214.1-201ENST00000511688 1107 ntBASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms