Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
COL4A3BPQ9Y5P4 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL4A3BPQ9Y5P4 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.35■□□□□ 0.69
COL4A3BPQ9Y5P4 LAGE3P1-201ENST00000425356 484 ntBASIC19.35■□□□□ 0.69
COL4A3BPQ9Y5P4 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
COL4A3BPQ9Y5P4 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL4A3BPQ9Y5P4 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC19.35■□□□□ 0.69
COL4A3BPQ9Y5P4 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC19.35■□□□□ 0.69
COL4A3BPQ9Y5P4 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.35■□□□□ 0.69
COL4A3BPQ9Y5P4 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC19.35■□□□□ 0.69
COL4A3BPQ9Y5P4 AC008735.5-201ENST00000623544 497 ntBASIC19.35■□□□□ 0.69
COL4A3BPQ9Y5P4 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
COL4A3BPQ9Y5P4 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
COL4A3BPQ9Y5P4 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.35■□□□□ 0.69
COL4A3BPQ9Y5P4 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19.35■□□□□ 0.69
COL4A3BPQ9Y5P4 AC009336.1-201ENST00000608941 1553 ntBASIC19.35■□□□□ 0.69
COL4A3BPQ9Y5P4 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL4A3BPQ9Y5P4 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
COL4A3BPQ9Y5P4 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COL4A3BPQ9Y5P4 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL4A3BPQ9Y5P4 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL4A3BPQ9Y5P4 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL4A3BPQ9Y5P4 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL4A3BPQ9Y5P4 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
COL4A3BPQ9Y5P4 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL4A3BPQ9Y5P4 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL4A3BPQ9Y5P4 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL4A3BPQ9Y5P4 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC19.34■□□□□ 0.69
COL4A3BPQ9Y5P4 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC19.34■□□□□ 0.69
COL4A3BPQ9Y5P4 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19.34■□□□□ 0.69
COL4A3BPQ9Y5P4 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC19.34■□□□□ 0.69
COL4A3BPQ9Y5P4 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
COL4A3BPQ9Y5P4 SLC25A1P1-201ENST00000528351 927 ntBASIC19.34■□□□□ 0.69
COL4A3BPQ9Y5P4 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC19.34■□□□□ 0.69
COL4A3BPQ9Y5P4 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC19.34■□□□□ 0.69
COL4A3BPQ9Y5P4 COPE-211ENST00000600932 1144 ntTSL 5 BASIC19.34■□□□□ 0.69
COL4A3BPQ9Y5P4 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL4A3BPQ9Y5P4 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL4A3BPQ9Y5P4 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
COL4A3BPQ9Y5P4 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL4A3BPQ9Y5P4 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.34■□□□□ 0.69
COL4A3BPQ9Y5P4 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC19.34■□□□□ 0.69
COL4A3BPQ9Y5P4 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL4A3BPQ9Y5P4 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC19.34■□□□□ 0.69
COL4A3BPQ9Y5P4 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL4A3BPQ9Y5P4 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC19.34■□□□□ 0.69
COL4A3BPQ9Y5P4 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
COL4A3BPQ9Y5P4 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC19.34■□□□□ 0.69
COL4A3BPQ9Y5P4 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
COL4A3BPQ9Y5P4 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL4A3BPQ9Y5P4 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL4A3BPQ9Y5P4 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
COL4A3BPQ9Y5P4 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC19.33■□□□□ 0.69
COL4A3BPQ9Y5P4 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
COL4A3BPQ9Y5P4 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
COL4A3BPQ9Y5P4 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
COL4A3BPQ9Y5P4 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
COL4A3BPQ9Y5P4 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
COL4A3BPQ9Y5P4 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
COL4A3BPQ9Y5P4 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.33■□□□□ 0.69
COL4A3BPQ9Y5P4 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
COL4A3BPQ9Y5P4 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
COL4A3BPQ9Y5P4 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.33■□□□□ 0.68
COL4A3BPQ9Y5P4 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.33■□□□□ 0.68
COL4A3BPQ9Y5P4 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC19.33■□□□□ 0.68
COL4A3BPQ9Y5P4 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC19.33■□□□□ 0.68
COL4A3BPQ9Y5P4 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.33■□□□□ 0.68
COL4A3BPQ9Y5P4 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.33■□□□□ 0.68
COL4A3BPQ9Y5P4 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
COL4A3BPQ9Y5P4 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL4A3BPQ9Y5P4 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC19.33■□□□□ 0.68
COL4A3BPQ9Y5P4 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL4A3BPQ9Y5P4 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
COL4A3BPQ9Y5P4 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
COL4A3BPQ9Y5P4 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL4A3BPQ9Y5P4 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL4A3BPQ9Y5P4 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL4A3BPQ9Y5P4 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL4A3BPQ9Y5P4 AC106820.2-201ENST00000563775 3264 ntBASIC19.33■□□□□ 0.68
COL4A3BPQ9Y5P4 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL4A3BPQ9Y5P4 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COL4A3BPQ9Y5P4 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL4A3BPQ9Y5P4 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
COL4A3BPQ9Y5P4 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC19.32■□□□□ 0.68
COL4A3BPQ9Y5P4 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COL4A3BPQ9Y5P4 AP001094.4-201ENST00000579008 2176 ntBASIC19.32■□□□□ 0.68
COL4A3BPQ9Y5P4 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.32■□□□□ 0.68
COL4A3BPQ9Y5P4 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COL4A3BPQ9Y5P4 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL4A3BPQ9Y5P4 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC19.32■□□□□ 0.68
COL4A3BPQ9Y5P4 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
COL4A3BPQ9Y5P4 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
COL4A3BPQ9Y5P4 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL4A3BPQ9Y5P4 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL4A3BPQ9Y5P4 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL4A3BPQ9Y5P4 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
COL4A3BPQ9Y5P4 INIP-202ENST00000374236 874 ntTSL 2 BASIC19.32■□□□□ 0.68
COL4A3BPQ9Y5P4 CSF3-203ENST00000394148 622 ntTSL 3 BASIC19.32■□□□□ 0.68
COL4A3BPQ9Y5P4 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.32■□□□□ 0.68
COL4A3BPQ9Y5P4 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms