Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAI2Q9Y5P3 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAI2Q9Y5P3 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.5■□□□□ 0.39
RAI2Q9Y5P3 AL023806.1-201ENST00000603994 1649 ntBASIC17.5■□□□□ 0.39
RAI2Q9Y5P3 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAI2Q9Y5P3 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.5■□□□□ 0.39
RAI2Q9Y5P3 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAI2Q9Y5P3 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RAI2Q9Y5P3 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAI2Q9Y5P3 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
RAI2Q9Y5P3 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
RAI2Q9Y5P3 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
RAI2Q9Y5P3 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.49■□□□□ 0.39
RAI2Q9Y5P3 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.49■□□□□ 0.39
RAI2Q9Y5P3 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAI2Q9Y5P3 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.49■□□□□ 0.39
RAI2Q9Y5P3 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAI2Q9Y5P3 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RAI2Q9Y5P3 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAI2Q9Y5P3 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
RAI2Q9Y5P3 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RAI2Q9Y5P3 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
RAI2Q9Y5P3 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.49■□□□□ 0.39
RAI2Q9Y5P3 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
RAI2Q9Y5P3 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAI2Q9Y5P3 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.49■□□□□ 0.39
RAI2Q9Y5P3 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAI2Q9Y5P3 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAI2Q9Y5P3 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAI2Q9Y5P3 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RAI2Q9Y5P3 KRT18P67-201ENST00000432816 1264 ntBASIC17.49■□□□□ 0.39
RAI2Q9Y5P3 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
RAI2Q9Y5P3 AF186996.4-201ENST00000467186 377 ntBASIC17.49■□□□□ 0.39
RAI2Q9Y5P3 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAI2Q9Y5P3 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.49■□□□□ 0.39
RAI2Q9Y5P3 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.49■□□□□ 0.39
RAI2Q9Y5P3 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.49■□□□□ 0.39
RAI2Q9Y5P3 AC055717.3-201ENST00000622967 595 ntBASIC17.49■□□□□ 0.39
RAI2Q9Y5P3 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
RAI2Q9Y5P3 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.49■□□□□ 0.39
RAI2Q9Y5P3 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
RAI2Q9Y5P3 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAI2Q9Y5P3 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAI2Q9Y5P3 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.49■□□□□ 0.39
RAI2Q9Y5P3 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAI2Q9Y5P3 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.49■□□□□ 0.39
RAI2Q9Y5P3 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAI2Q9Y5P3 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAI2Q9Y5P3 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
RAI2Q9Y5P3 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RAI2Q9Y5P3 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAI2Q9Y5P3 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAI2Q9Y5P3 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.48■□□□□ 0.39
RAI2Q9Y5P3 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAI2Q9Y5P3 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAI2Q9Y5P3 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.48■□□□□ 0.39
RAI2Q9Y5P3 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
RAI2Q9Y5P3 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
RAI2Q9Y5P3 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
RAI2Q9Y5P3 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RAI2Q9Y5P3 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAI2Q9Y5P3 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.48■□□□□ 0.39
RAI2Q9Y5P3 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.48■□□□□ 0.39
RAI2Q9Y5P3 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
RAI2Q9Y5P3 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.48■□□□□ 0.39
RAI2Q9Y5P3 LINC00982-205ENST00000420957 435 ntBASIC17.48■□□□□ 0.39
RAI2Q9Y5P3 RPS2P1-201ENST00000434010 821 ntBASIC17.48■□□□□ 0.39
RAI2Q9Y5P3 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.48■□□□□ 0.39
RAI2Q9Y5P3 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.48■□□□□ 0.39
RAI2Q9Y5P3 AL589182.2-201ENST00000619332 1049 ntBASIC17.48■□□□□ 0.39
RAI2Q9Y5P3 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAI2Q9Y5P3 AC243591.1-201ENST00000452967 1364 ntBASIC17.48■□□□□ 0.39
RAI2Q9Y5P3 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAI2Q9Y5P3 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
RAI2Q9Y5P3 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
RAI2Q9Y5P3 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAI2Q9Y5P3 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAI2Q9Y5P3 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAI2Q9Y5P3 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.47■□□□□ 0.39
RAI2Q9Y5P3 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
RAI2Q9Y5P3 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAI2Q9Y5P3 NCF1C-201ENST00000438382 1427 ntBASIC17.47■□□□□ 0.39
RAI2Q9Y5P3 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RAI2Q9Y5P3 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
RAI2Q9Y5P3 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.47■□□□□ 0.39
RAI2Q9Y5P3 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RAI2Q9Y5P3 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
RAI2Q9Y5P3 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAI2Q9Y5P3 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.47■□□□□ 0.39
RAI2Q9Y5P3 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
RAI2Q9Y5P3 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.47■□□□□ 0.39
RAI2Q9Y5P3 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.47■□□□□ 0.39
RAI2Q9Y5P3 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
RAI2Q9Y5P3 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAI2Q9Y5P3 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.47■□□□□ 0.39
RAI2Q9Y5P3 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.47■□□□□ 0.39
RAI2Q9Y5P3 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
RAI2Q9Y5P3 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.47■□□□□ 0.39
RAI2Q9Y5P3 ACTG1P4-201ENST00000425123 1122 ntBASIC17.47■□□□□ 0.39
RAI2Q9Y5P3 AC018712.1-201ENST00000455767 687 ntBASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms