Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
R3HCC1Q9Y3T6 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
R3HCC1Q9Y3T6 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC19.88■□□□□ 0.77
R3HCC1Q9Y3T6 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
R3HCC1Q9Y3T6 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
R3HCC1Q9Y3T6 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
R3HCC1Q9Y3T6 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
R3HCC1Q9Y3T6 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
R3HCC1Q9Y3T6 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
R3HCC1Q9Y3T6 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.88■□□□□ 0.77
R3HCC1Q9Y3T6 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
R3HCC1Q9Y3T6 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
R3HCC1Q9Y3T6 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.88■□□□□ 0.77
R3HCC1Q9Y3T6 AL671277.2-201ENST00000458060 996 ntBASIC19.88■□□□□ 0.77
R3HCC1Q9Y3T6 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.88■□□□□ 0.77
R3HCC1Q9Y3T6 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.88■□□□□ 0.77
R3HCC1Q9Y3T6 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
R3HCC1Q9Y3T6 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC19.88■□□□□ 0.77
R3HCC1Q9Y3T6 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
R3HCC1Q9Y3T6 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
R3HCC1Q9Y3T6 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
R3HCC1Q9Y3T6 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC19.88■□□□□ 0.77
R3HCC1Q9Y3T6 AL603756.1-201ENST00000606511 2163 ntBASIC19.88■□□□□ 0.77
R3HCC1Q9Y3T6 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
R3HCC1Q9Y3T6 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
R3HCC1Q9Y3T6 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
R3HCC1Q9Y3T6 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.88■□□□□ 0.77
R3HCC1Q9Y3T6 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.88■□□□□ 0.77
R3HCC1Q9Y3T6 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
R3HCC1Q9Y3T6 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
R3HCC1Q9Y3T6 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
R3HCC1Q9Y3T6 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
R3HCC1Q9Y3T6 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
R3HCC1Q9Y3T6 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
R3HCC1Q9Y3T6 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC19.87■□□□□ 0.77
R3HCC1Q9Y3T6 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.87■□□□□ 0.77
R3HCC1Q9Y3T6 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
R3HCC1Q9Y3T6 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
R3HCC1Q9Y3T6 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
R3HCC1Q9Y3T6 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
R3HCC1Q9Y3T6 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
R3HCC1Q9Y3T6 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC19.87■□□□□ 0.77
R3HCC1Q9Y3T6 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
R3HCC1Q9Y3T6 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
R3HCC1Q9Y3T6 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
R3HCC1Q9Y3T6 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
R3HCC1Q9Y3T6 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
R3HCC1Q9Y3T6 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
R3HCC1Q9Y3T6 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
R3HCC1Q9Y3T6 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
R3HCC1Q9Y3T6 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.87■□□□□ 0.77
R3HCC1Q9Y3T6 KRT18P35-201ENST00000510488 1269 ntBASIC19.87■□□□□ 0.77
R3HCC1Q9Y3T6 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.87■□□□□ 0.77
R3HCC1Q9Y3T6 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
R3HCC1Q9Y3T6 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC19.87■□□□□ 0.77
R3HCC1Q9Y3T6 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
R3HCC1Q9Y3T6 AC007950.2-201ENST00000615045 2347 ntBASIC19.87■□□□□ 0.77
R3HCC1Q9Y3T6 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
R3HCC1Q9Y3T6 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
R3HCC1Q9Y3T6 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC19.87■□□□□ 0.77
R3HCC1Q9Y3T6 AL355312.1-201ENST00000407115 2176 ntBASIC19.87■□□□□ 0.77
R3HCC1Q9Y3T6 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
R3HCC1Q9Y3T6 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
R3HCC1Q9Y3T6 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
R3HCC1Q9Y3T6 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
R3HCC1Q9Y3T6 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
R3HCC1Q9Y3T6 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
R3HCC1Q9Y3T6 AC009102.3-201ENST00000623118 1491 ntBASIC19.86■□□□□ 0.77
R3HCC1Q9Y3T6 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
R3HCC1Q9Y3T6 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
R3HCC1Q9Y3T6 LINC01311-201ENST00000565162 1445 ntBASIC19.86■□□□□ 0.77
R3HCC1Q9Y3T6 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
R3HCC1Q9Y3T6 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
R3HCC1Q9Y3T6 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
R3HCC1Q9Y3T6 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
R3HCC1Q9Y3T6 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
R3HCC1Q9Y3T6 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
R3HCC1Q9Y3T6 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
R3HCC1Q9Y3T6 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
R3HCC1Q9Y3T6 MIR149-201ENST00000384879 89 ntBASIC19.86■□□□□ 0.77
R3HCC1Q9Y3T6 SPDYE15P-201ENST00000424157 909 ntBASIC19.86■□□□□ 0.77
R3HCC1Q9Y3T6 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.86■□□□□ 0.77
R3HCC1Q9Y3T6 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.86■□□□□ 0.77
R3HCC1Q9Y3T6 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
R3HCC1Q9Y3T6 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.86■□□□□ 0.77
R3HCC1Q9Y3T6 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.86■□□□□ 0.77
R3HCC1Q9Y3T6 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.86■□□□□ 0.77
R3HCC1Q9Y3T6 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
R3HCC1Q9Y3T6 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
R3HCC1Q9Y3T6 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
R3HCC1Q9Y3T6 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
R3HCC1Q9Y3T6 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.86■□□□□ 0.77
R3HCC1Q9Y3T6 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.86■□□□□ 0.77
R3HCC1Q9Y3T6 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
R3HCC1Q9Y3T6 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
R3HCC1Q9Y3T6 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
R3HCC1Q9Y3T6 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
R3HCC1Q9Y3T6 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
R3HCC1Q9Y3T6 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
R3HCC1Q9Y3T6 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms