Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MRPS28Q9Y2Q9 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
MRPS28Q9Y2Q9 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
MRPS28Q9Y2Q9 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MRPS28Q9Y2Q9 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
MRPS28Q9Y2Q9 AC018695.7-201ENST00000624587 2492 ntBASIC14.93□□□□□ -0.02
MRPS28Q9Y2Q9 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
MRPS28Q9Y2Q9 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
MRPS28Q9Y2Q9 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
MRPS28Q9Y2Q9 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.93□□□□□ -0.02
MRPS28Q9Y2Q9 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
MRPS28Q9Y2Q9 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MRPS28Q9Y2Q9 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
MRPS28Q9Y2Q9 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MRPS28Q9Y2Q9 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
MRPS28Q9Y2Q9 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MRPS28Q9Y2Q9 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC14.92□□□□□ -0.02
MRPS28Q9Y2Q9 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
MRPS28Q9Y2Q9 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MRPS28Q9Y2Q9 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.92□□□□□ -0.02
MRPS28Q9Y2Q9 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
MRPS28Q9Y2Q9 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MRPS28Q9Y2Q9 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
MRPS28Q9Y2Q9 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MRPS28Q9Y2Q9 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.92□□□□□ -0.02
MRPS28Q9Y2Q9 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MRPS28Q9Y2Q9 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
MRPS28Q9Y2Q9 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
MRPS28Q9Y2Q9 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
MRPS28Q9Y2Q9 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
MRPS28Q9Y2Q9 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
MRPS28Q9Y2Q9 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC14.92□□□□□ -0.02
MRPS28Q9Y2Q9 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC14.92□□□□□ -0.02
MRPS28Q9Y2Q9 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC14.92□□□□□ -0.02
MRPS28Q9Y2Q9 AC109462.3-201ENST00000573934 613 ntBASIC14.92□□□□□ -0.02
MRPS28Q9Y2Q9 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC14.92□□□□□ -0.02
MRPS28Q9Y2Q9 FGF14-AS2-201ENST00000606448 1074 ntBASIC14.92□□□□□ -0.02
MRPS28Q9Y2Q9 AL390719.2-201ENST00000606993 987 ntBASIC14.92□□□□□ -0.02
MRPS28Q9Y2Q9 AC073912.3-201ENST00000624414 853 ntBASIC14.92□□□□□ -0.02
MRPS28Q9Y2Q9 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
MRPS28Q9Y2Q9 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
MRPS28Q9Y2Q9 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MRPS28Q9Y2Q9 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC14.92□□□□□ -0.02
MRPS28Q9Y2Q9 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.92□□□□□ -0.02
MRPS28Q9Y2Q9 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MRPS28Q9Y2Q9 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.92□□□□□ -0.02
MRPS28Q9Y2Q9 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
MRPS28Q9Y2Q9 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
MRPS28Q9Y2Q9 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.92□□□□□ -0.02
MRPS28Q9Y2Q9 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MRPS28Q9Y2Q9 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MRPS28Q9Y2Q9 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.92□□□□□ -0.02
MRPS28Q9Y2Q9 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
MRPS28Q9Y2Q9 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
MRPS28Q9Y2Q9 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
MRPS28Q9Y2Q9 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
MRPS28Q9Y2Q9 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC14.92□□□□□ -0.02
MRPS28Q9Y2Q9 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC14.92□□□□□ -0.02
MRPS28Q9Y2Q9 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
MRPS28Q9Y2Q9 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
MRPS28Q9Y2Q9 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
MRPS28Q9Y2Q9 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
MRPS28Q9Y2Q9 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MRPS28Q9Y2Q9 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.91□□□□□ -0.02
MRPS28Q9Y2Q9 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MRPS28Q9Y2Q9 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
MRPS28Q9Y2Q9 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MRPS28Q9Y2Q9 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MRPS28Q9Y2Q9 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MRPS28Q9Y2Q9 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MRPS28Q9Y2Q9 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MRPS28Q9Y2Q9 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MRPS28Q9Y2Q9 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC14.91□□□□□ -0.02
MRPS28Q9Y2Q9 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
MRPS28Q9Y2Q9 HBZP1-201ENST00000354915 429 ntBASIC14.91□□□□□ -0.02
MRPS28Q9Y2Q9 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
MRPS28Q9Y2Q9 AL137013.1-201ENST00000432946 1228 ntBASIC14.91□□□□□ -0.02
MRPS28Q9Y2Q9 GXYLT1P3-201ENST00000453058 1193 ntBASIC14.91□□□□□ -0.02
MRPS28Q9Y2Q9 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC14.91□□□□□ -0.02
MRPS28Q9Y2Q9 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC14.91□□□□□ -0.02
MRPS28Q9Y2Q9 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC14.91□□□□□ -0.02
MRPS28Q9Y2Q9 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
MRPS28Q9Y2Q9 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC14.91□□□□□ -0.02
MRPS28Q9Y2Q9 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC14.91□□□□□ -0.02
MRPS28Q9Y2Q9 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC14.91□□□□□ -0.02
MRPS28Q9Y2Q9 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC14.91□□□□□ -0.02
MRPS28Q9Y2Q9 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC14.91□□□□□ -0.02
MRPS28Q9Y2Q9 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MRPS28Q9Y2Q9 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC14.91□□□□□ -0.02
MRPS28Q9Y2Q9 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MRPS28Q9Y2Q9 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC14.91□□□□□ -0.02
MRPS28Q9Y2Q9 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MRPS28Q9Y2Q9 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
MRPS28Q9Y2Q9 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
MRPS28Q9Y2Q9 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MRPS28Q9Y2Q9 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MRPS28Q9Y2Q9 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
MRPS28Q9Y2Q9 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MRPS28Q9Y2Q9 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
MRPS28Q9Y2Q9 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms