Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC12.71□□□□□ -0.38
HHLA3Q9XRX5 BANP-201ENST00000286122 2368 ntTSL 5 BASIC12.71□□□□□ -0.38
HHLA3Q9XRX5 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
HHLA3Q9XRX5 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
HHLA3Q9XRX5 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
HHLA3Q9XRX5 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
HHLA3Q9XRX5 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
HHLA3Q9XRX5 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
HHLA3Q9XRX5 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 WT1-209ENST00000530998 2421 ntTSL 2 BASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 IGHGP-201ENST00000390555 1178 ntBASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 DDT-203ENST00000403754 569 ntTSL 3 BASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 TSPY12P-201ENST00000421279 868 ntBASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 DDT-206ENST00000430101 573 ntTSL 2 BASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 DAP-202ENST00000432074 1048 ntTSL 2 BASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 KRT18P65-201ENST00000439811 1286 ntBASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 GPR32P1-201ENST00000601788 811 ntBASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 GXYLT1P4-201ENST00000613576 1192 ntBASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 AC004263.2-201ENST00000617183 678 ntBASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 HYMAI.1-201ENST00000620949 238 ntBASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 AL590326.2-201ENST00000625139 305 ntBASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 DFFB-212ENST00000625756 649 ntTSL 5 BASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 LINC00167-201ENST00000530583 1419 ntBASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HHLA3Q9XRX5 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC12.69□□□□□ -0.38
HHLA3Q9XRX5 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC12.69□□□□□ -0.38
HHLA3Q9XRX5 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC12.69□□□□□ -0.38
HHLA3Q9XRX5 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HHLA3Q9XRX5 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HHLA3Q9XRX5 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC12.69□□□□□ -0.38
HHLA3Q9XRX5 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC12.69□□□□□ -0.38
HHLA3Q9XRX5 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
HHLA3Q9XRX5 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HHLA3Q9XRX5 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
HHLA3Q9XRX5 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HHLA3Q9XRX5 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HHLA3Q9XRX5 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
HHLA3Q9XRX5 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
HHLA3Q9XRX5 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC12.69□□□□□ -0.38
HHLA3Q9XRX5 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HHLA3Q9XRX5 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HHLA3Q9XRX5 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HHLA3Q9XRX5 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC12.69□□□□□ -0.38
HHLA3Q9XRX5 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms