Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PDZRN3Q9UPQ7 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
PDZRN3Q9UPQ7 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
PDZRN3Q9UPQ7 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PDZRN3Q9UPQ7 METTL26-205ENST00000397666 726 ntTSL 2 BASIC22.29■■□□□ 1.16
PDZRN3Q9UPQ7 AC023274.1-201ENST00000418278 595 ntBASIC22.29■■□□□ 1.16
PDZRN3Q9UPQ7 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC22.29■■□□□ 1.16
PDZRN3Q9UPQ7 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC22.29■■□□□ 1.16
PDZRN3Q9UPQ7 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC22.29■■□□□ 1.16
PDZRN3Q9UPQ7 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC22.29■■□□□ 1.16
PDZRN3Q9UPQ7 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC22.29■■□□□ 1.16
PDZRN3Q9UPQ7 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC22.29■■□□□ 1.16
PDZRN3Q9UPQ7 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC22.29■■□□□ 1.16
PDZRN3Q9UPQ7 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PDZRN3Q9UPQ7 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC22.29■■□□□ 1.16
PDZRN3Q9UPQ7 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PDZRN3Q9UPQ7 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PDZRN3Q9UPQ7 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC22.29■■□□□ 1.16
PDZRN3Q9UPQ7 PRORSD1P-202ENST00000563365 2154 ntBASIC22.29■■□□□ 1.16
PDZRN3Q9UPQ7 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PDZRN3Q9UPQ7 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PDZRN3Q9UPQ7 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
PDZRN3Q9UPQ7 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PDZRN3Q9UPQ7 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
PDZRN3Q9UPQ7 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PDZRN3Q9UPQ7 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PDZRN3Q9UPQ7 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PDZRN3Q9UPQ7 AL023806.1-201ENST00000603994 1649 ntBASIC22.28■■□□□ 1.16
PDZRN3Q9UPQ7 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
PDZRN3Q9UPQ7 KRT8P47-201ENST00000604727 1398 ntBASIC22.28■■□□□ 1.16
PDZRN3Q9UPQ7 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
PDZRN3Q9UPQ7 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
PDZRN3Q9UPQ7 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PDZRN3Q9UPQ7 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC22.28■■□□□ 1.16
PDZRN3Q9UPQ7 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC22.28■■□□□ 1.16
PDZRN3Q9UPQ7 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC22.28■■□□□ 1.16
PDZRN3Q9UPQ7 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PDZRN3Q9UPQ7 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PDZRN3Q9UPQ7 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PDZRN3Q9UPQ7 PMPCAP1-201ENST00000508114 1576 ntBASIC22.28■■□□□ 1.16
PDZRN3Q9UPQ7 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC22.28■■□□□ 1.16
PDZRN3Q9UPQ7 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
PDZRN3Q9UPQ7 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PDZRN3Q9UPQ7 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PDZRN3Q9UPQ7 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PDZRN3Q9UPQ7 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PDZRN3Q9UPQ7 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC22.27■■□□□ 1.16
PDZRN3Q9UPQ7 CROCCP2-202ENST00000412962 2773 ntBASIC22.27■■□□□ 1.16
PDZRN3Q9UPQ7 AC002310.6-201ENST00000624451 1377 ntBASIC22.27■■□□□ 1.16
PDZRN3Q9UPQ7 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PDZRN3Q9UPQ7 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC22.27■■□□□ 1.16
PDZRN3Q9UPQ7 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
PDZRN3Q9UPQ7 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PDZRN3Q9UPQ7 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC22.27■■□□□ 1.16
PDZRN3Q9UPQ7 AC073621.1-201ENST00000392730 636 ntBASIC22.27■■□□□ 1.16
PDZRN3Q9UPQ7 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC22.27■■□□□ 1.16
PDZRN3Q9UPQ7 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PDZRN3Q9UPQ7 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC22.27■■□□□ 1.16
PDZRN3Q9UPQ7 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PDZRN3Q9UPQ7 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC22.27■■□□□ 1.16
PDZRN3Q9UPQ7 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC22.27■■□□□ 1.16
PDZRN3Q9UPQ7 SIGLEC16-201ENST00000599858 1437 ntBASIC22.27■■□□□ 1.16
PDZRN3Q9UPQ7 AL138688.1-201ENST00000624851 1594 ntBASIC22.27■■□□□ 1.16
PDZRN3Q9UPQ7 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
PDZRN3Q9UPQ7 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PDZRN3Q9UPQ7 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PDZRN3Q9UPQ7 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PDZRN3Q9UPQ7 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
PDZRN3Q9UPQ7 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
PDZRN3Q9UPQ7 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PDZRN3Q9UPQ7 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC22.27■■□□□ 1.16
PDZRN3Q9UPQ7 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PDZRN3Q9UPQ7 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
PDZRN3Q9UPQ7 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
PDZRN3Q9UPQ7 TBC1D3P5-201ENST00000579401 1545 ntBASIC22.26■■□□□ 1.15
PDZRN3Q9UPQ7 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PDZRN3Q9UPQ7 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
PDZRN3Q9UPQ7 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
PDZRN3Q9UPQ7 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC22.26■■□□□ 1.15
PDZRN3Q9UPQ7 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PDZRN3Q9UPQ7 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
PDZRN3Q9UPQ7 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
PDZRN3Q9UPQ7 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PDZRN3Q9UPQ7 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PDZRN3Q9UPQ7 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC22.26■■□□□ 1.15
PDZRN3Q9UPQ7 AC254562.1-201ENST00000417586 456 ntBASIC22.26■■□□□ 1.15
PDZRN3Q9UPQ7 AC108751.1-201ENST00000490852 363 ntBASIC22.26■■□□□ 1.15
PDZRN3Q9UPQ7 AC122714.2-201ENST00000502787 707 ntBASIC22.26■■□□□ 1.15
PDZRN3Q9UPQ7 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC22.26■■□□□ 1.15
PDZRN3Q9UPQ7 AC136632.2-201ENST00000512891 861 ntBASIC22.26■■□□□ 1.15
PDZRN3Q9UPQ7 MIR3197-201ENST00000582241 73 ntBASIC22.26■■□□□ 1.15
PDZRN3Q9UPQ7 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PDZRN3Q9UPQ7 CYGB-205ENST00000590175 830 ntTSL 3 BASIC22.26■■□□□ 1.15
PDZRN3Q9UPQ7 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC22.26■■□□□ 1.15
PDZRN3Q9UPQ7 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC22.26■■□□□ 1.15
PDZRN3Q9UPQ7 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC22.26■■□□□ 1.15
PDZRN3Q9UPQ7 AP001094.4-201ENST00000579008 2176 ntBASIC22.26■■□□□ 1.15
PDZRN3Q9UPQ7 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PDZRN3Q9UPQ7 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC22.25■■□□□ 1.15
PDZRN3Q9UPQ7 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC22.25■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms