Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 OR7E47P-204ENST00000575924 449 ntBASIC18.5■□□□□ 0.55
UBQLN1Q9UMX0 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
UBQLN1Q9UMX0 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
UBQLN1Q9UMX0 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBQLN1Q9UMX0 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBQLN1Q9UMX0 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.5■□□□□ 0.55
UBQLN1Q9UMX0 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBQLN1Q9UMX0 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
UBQLN1Q9UMX0 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBQLN1Q9UMX0 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
UBQLN1Q9UMX0 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
UBQLN1Q9UMX0 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBQLN1Q9UMX0 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
UBQLN1Q9UMX0 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBQLN1Q9UMX0 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
UBQLN1Q9UMX0 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.49■□□□□ 0.55
UBQLN1Q9UMX0 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.49■□□□□ 0.55
UBQLN1Q9UMX0 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
UBQLN1Q9UMX0 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBQLN1Q9UMX0 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBQLN1Q9UMX0 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBQLN1Q9UMX0 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBQLN1Q9UMX0 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.49■□□□□ 0.55
UBQLN1Q9UMX0 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
UBQLN1Q9UMX0 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.49■□□□□ 0.55
UBQLN1Q9UMX0 COX10-202ENST00000429152 875 ntTSL 2 BASIC18.49■□□□□ 0.55
UBQLN1Q9UMX0 KRT18P2-201ENST00000447938 1258 ntBASIC18.49■□□□□ 0.55
UBQLN1Q9UMX0 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.49■□□□□ 0.55
UBQLN1Q9UMX0 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.49■□□□□ 0.55
UBQLN1Q9UMX0 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.49■□□□□ 0.55
UBQLN1Q9UMX0 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
UBQLN1Q9UMX0 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.49■□□□□ 0.55
UBQLN1Q9UMX0 EGFEM1P-202ENST00000431685 1563 ntBASIC18.49■□□□□ 0.55
UBQLN1Q9UMX0 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBQLN1Q9UMX0 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBQLN1Q9UMX0 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBQLN1Q9UMX0 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.49■□□□□ 0.55
UBQLN1Q9UMX0 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBQLN1Q9UMX0 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
UBQLN1Q9UMX0 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBQLN1Q9UMX0 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
UBQLN1Q9UMX0 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
UBQLN1Q9UMX0 AC093525.9-201ENST00000624961 1746 ntBASIC18.49■□□□□ 0.55
UBQLN1Q9UMX0 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.49■□□□□ 0.55
UBQLN1Q9UMX0 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBQLN1Q9UMX0 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
UBQLN1Q9UMX0 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBQLN1Q9UMX0 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBQLN1Q9UMX0 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
UBQLN1Q9UMX0 AC116353.5-201ENST00000638148 1699 ntBASIC18.48■□□□□ 0.55
UBQLN1Q9UMX0 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBQLN1Q9UMX0 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBQLN1Q9UMX0 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
UBQLN1Q9UMX0 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBQLN1Q9UMX0 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
UBQLN1Q9UMX0 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
UBQLN1Q9UMX0 SLC25A1P3-201ENST00000395415 828 ntBASIC18.48■□□□□ 0.55
UBQLN1Q9UMX0 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
UBQLN1Q9UMX0 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.48■□□□□ 0.55
UBQLN1Q9UMX0 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.48■□□□□ 0.55
UBQLN1Q9UMX0 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBQLN1Q9UMX0 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
UBQLN1Q9UMX0 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.48■□□□□ 0.55
UBQLN1Q9UMX0 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.48■□□□□ 0.55
UBQLN1Q9UMX0 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.48■□□□□ 0.55
UBQLN1Q9UMX0 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
UBQLN1Q9UMX0 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBQLN1Q9UMX0 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
UBQLN1Q9UMX0 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
UBQLN1Q9UMX0 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
UBQLN1Q9UMX0 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
UBQLN1Q9UMX0 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.48■□□□□ 0.55
UBQLN1Q9UMX0 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
UBQLN1Q9UMX0 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
UBQLN1Q9UMX0 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
UBQLN1Q9UMX0 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.48■□□□□ 0.55
UBQLN1Q9UMX0 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
UBQLN1Q9UMX0 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.48■□□□□ 0.55
UBQLN1Q9UMX0 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.48■□□□□ 0.55
UBQLN1Q9UMX0 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBQLN1Q9UMX0 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.47■□□□□ 0.55
UBQLN1Q9UMX0 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.47■□□□□ 0.55
UBQLN1Q9UMX0 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.47■□□□□ 0.55
UBQLN1Q9UMX0 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.47■□□□□ 0.55
UBQLN1Q9UMX0 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.47■□□□□ 0.55
UBQLN1Q9UMX0 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBQLN1Q9UMX0 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
UBQLN1Q9UMX0 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBQLN1Q9UMX0 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
UBQLN1Q9UMX0 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBQLN1Q9UMX0 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBQLN1Q9UMX0 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBQLN1Q9UMX0 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
UBQLN1Q9UMX0 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
UBQLN1Q9UMX0 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
UBQLN1Q9UMX0 IGLL3P-201ENST00000412472 434 ntBASIC18.47■□□□□ 0.55
UBQLN1Q9UMX0 AC087163.2-201ENST00000457299 853 ntBASIC18.47■□□□□ 0.55
UBQLN1Q9UMX0 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.47■□□□□ 0.55
UBQLN1Q9UMX0 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.47■□□□□ 0.55
UBQLN1Q9UMX0 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms