Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL20A1Q9P218 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL20A1Q9P218 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL20A1Q9P218 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COL20A1Q9P218 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
COL20A1Q9P218 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COL20A1Q9P218 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL20A1Q9P218 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL20A1Q9P218 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC19.43■□□□□ 0.7
COL20A1Q9P218 PP12613-201ENST00000424958 2230 ntBASIC19.43■□□□□ 0.7
COL20A1Q9P218 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COL20A1Q9P218 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL20A1Q9P218 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL20A1Q9P218 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL20A1Q9P218 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COL20A1Q9P218 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC19.43■□□□□ 0.7
COL20A1Q9P218 FALEC-201ENST00000416894 566 ntTSL 3 BASIC19.43■□□□□ 0.7
COL20A1Q9P218 CEND1P1-201ENST00000451006 455 ntBASIC19.43■□□□□ 0.7
COL20A1Q9P218 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC19.43■□□□□ 0.7
COL20A1Q9P218 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
COL20A1Q9P218 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.43■□□□□ 0.7
COL20A1Q9P218 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COL20A1Q9P218 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC19.43■□□□□ 0.7
COL20A1Q9P218 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC19.43■□□□□ 0.7
COL20A1Q9P218 AC068137.2-201ENST00000605408 478 ntBASIC19.43■□□□□ 0.7
COL20A1Q9P218 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC19.43■□□□□ 0.7
COL20A1Q9P218 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
COL20A1Q9P218 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
COL20A1Q9P218 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COL20A1Q9P218 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL20A1Q9P218 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19.43■□□□□ 0.7
COL20A1Q9P218 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COL20A1Q9P218 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL20A1Q9P218 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.43■□□□□ 0.7
COL20A1Q9P218 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL20A1Q9P218 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.42■□□□□ 0.7
COL20A1Q9P218 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC19.42■□□□□ 0.7
COL20A1Q9P218 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL20A1Q9P218 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
COL20A1Q9P218 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC19.42■□□□□ 0.7
COL20A1Q9P218 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.42■□□□□ 0.7
COL20A1Q9P218 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL20A1Q9P218 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19.42■□□□□ 0.7
COL20A1Q9P218 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
COL20A1Q9P218 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL20A1Q9P218 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC19.42■□□□□ 0.7
COL20A1Q9P218 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL20A1Q9P218 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
COL20A1Q9P218 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL20A1Q9P218 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.42■□□□□ 0.7
COL20A1Q9P218 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC19.42■□□□□ 0.7
COL20A1Q9P218 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COL20A1Q9P218 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC19.42■□□□□ 0.7
COL20A1Q9P218 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL20A1Q9P218 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL20A1Q9P218 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC19.42■□□□□ 0.7
COL20A1Q9P218 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.42■□□□□ 0.7
COL20A1Q9P218 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL20A1Q9P218 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL20A1Q9P218 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COL20A1Q9P218 AC016396.2-201ENST00000562575 1417 ntBASIC19.42■□□□□ 0.7
COL20A1Q9P218 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL20A1Q9P218 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COL20A1Q9P218 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL20A1Q9P218 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL20A1Q9P218 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL20A1Q9P218 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL20A1Q9P218 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.41■□□□□ 0.7
COL20A1Q9P218 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COL20A1Q9P218 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL20A1Q9P218 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COL20A1Q9P218 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC19.41■□□□□ 0.7
COL20A1Q9P218 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COL20A1Q9P218 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC19.41■□□□□ 0.7
COL20A1Q9P218 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.41■□□□□ 0.7
COL20A1Q9P218 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC19.41■□□□□ 0.7
COL20A1Q9P218 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC19.41■□□□□ 0.7
COL20A1Q9P218 CITED2-204ENST00000618718 901 ntTSL 2 BASIC19.41■□□□□ 0.7
COL20A1Q9P218 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL20A1Q9P218 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC19.41■□□□□ 0.7
COL20A1Q9P218 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COL20A1Q9P218 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
COL20A1Q9P218 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL20A1Q9P218 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL20A1Q9P218 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL20A1Q9P218 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
COL20A1Q9P218 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC19.41■□□□□ 0.7
COL20A1Q9P218 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COL20A1Q9P218 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL20A1Q9P218 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COL20A1Q9P218 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL20A1Q9P218 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC19.4■□□□□ 0.7
COL20A1Q9P218 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL20A1Q9P218 CROCCP2-202ENST00000412962 2773 ntBASIC19.4■□□□□ 0.7
COL20A1Q9P218 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC19.4■□□□□ 0.7
COL20A1Q9P218 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
COL20A1Q9P218 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL20A1Q9P218 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC19.4■□□□□ 0.7
COL20A1Q9P218 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.4■□□□□ 0.7
COL20A1Q9P218 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms