Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HMG20BQ9P0W2 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HMG20BQ9P0W2 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC21.02■□□□□ 0.96
HMG20BQ9P0W2 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
HMG20BQ9P0W2 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HMG20BQ9P0W2 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC21.02■□□□□ 0.96
HMG20BQ9P0W2 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
HMG20BQ9P0W2 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC21.02■□□□□ 0.96
HMG20BQ9P0W2 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
HMG20BQ9P0W2 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
HMG20BQ9P0W2 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
HMG20BQ9P0W2 KRT18P2-201ENST00000447938 1258 ntBASIC21.02■□□□□ 0.96
HMG20BQ9P0W2 HS6ST1P1-201ENST00000481504 1234 ntBASIC21.02■□□□□ 0.96
HMG20BQ9P0W2 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC21.02■□□□□ 0.96
HMG20BQ9P0W2 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC21.02■□□□□ 0.96
HMG20BQ9P0W2 AC004790.2-201ENST00000623588 572 ntBASIC21.02■□□□□ 0.96
HMG20BQ9P0W2 AL023806.1-201ENST00000603994 1649 ntBASIC21.02■□□□□ 0.96
HMG20BQ9P0W2 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HMG20BQ9P0W2 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC21.02■□□□□ 0.96
HMG20BQ9P0W2 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
HMG20BQ9P0W2 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
HMG20BQ9P0W2 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
HMG20BQ9P0W2 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
HMG20BQ9P0W2 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
HMG20BQ9P0W2 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC21.01■□□□□ 0.95
HMG20BQ9P0W2 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HMG20BQ9P0W2 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HMG20BQ9P0W2 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC21.01■□□□□ 0.95
HMG20BQ9P0W2 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
HMG20BQ9P0W2 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
HMG20BQ9P0W2 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
HMG20BQ9P0W2 TPR-209ENST00000613151 2478 ntTSL 5 BASIC21.01■□□□□ 0.95
HMG20BQ9P0W2 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC21.01■□□□□ 0.95
HMG20BQ9P0W2 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC21.01■□□□□ 0.95
HMG20BQ9P0W2 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HMG20BQ9P0W2 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC21.01■□□□□ 0.95
HMG20BQ9P0W2 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC21.01■□□□□ 0.95
HMG20BQ9P0W2 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
HMG20BQ9P0W2 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
HMG20BQ9P0W2 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC21.01■□□□□ 0.95
HMG20BQ9P0W2 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
HMG20BQ9P0W2 AP002414.1-201ENST00000391405 1147 ntBASIC21.01■□□□□ 0.95
HMG20BQ9P0W2 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC21.01■□□□□ 0.95
HMG20BQ9P0W2 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC21.01■□□□□ 0.95
HMG20BQ9P0W2 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC21.01■□□□□ 0.95
HMG20BQ9P0W2 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC21.01■□□□□ 0.95
HMG20BQ9P0W2 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC21.01■□□□□ 0.95
HMG20BQ9P0W2 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC21.01■□□□□ 0.95
HMG20BQ9P0W2 AC064836.3-201ENST00000607928 673 ntBASIC21.01■□□□□ 0.95
HMG20BQ9P0W2 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HMG20BQ9P0W2 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC21.01■□□□□ 0.95
HMG20BQ9P0W2 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HMG20BQ9P0W2 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HMG20BQ9P0W2 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC21■□□□□ 0.95
HMG20BQ9P0W2 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC21■□□□□ 0.95
HMG20BQ9P0W2 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
HMG20BQ9P0W2 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC21■□□□□ 0.95
HMG20BQ9P0W2 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC21■□□□□ 0.95
HMG20BQ9P0W2 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
HMG20BQ9P0W2 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
HMG20BQ9P0W2 IMP4-203ENST00000409935 958 ntTSL 5 BASIC21■□□□□ 0.95
HMG20BQ9P0W2 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC21■□□□□ 0.95
HMG20BQ9P0W2 RPP21-221ENST00000428040 594 ntTSL 2 BASIC21■□□□□ 0.95
HMG20BQ9P0W2 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HMG20BQ9P0W2 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC21■□□□□ 0.95
HMG20BQ9P0W2 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC21■□□□□ 0.95
HMG20BQ9P0W2 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC21■□□□□ 0.95
HMG20BQ9P0W2 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC21■□□□□ 0.95
HMG20BQ9P0W2 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC21■□□□□ 0.95
HMG20BQ9P0W2 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
HMG20BQ9P0W2 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
HMG20BQ9P0W2 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC21■□□□□ 0.95
HMG20BQ9P0W2 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HMG20BQ9P0W2 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
HMG20BQ9P0W2 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC21■□□□□ 0.95
HMG20BQ9P0W2 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.99■□□□□ 0.95
HMG20BQ9P0W2 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
HMG20BQ9P0W2 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
HMG20BQ9P0W2 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
HMG20BQ9P0W2 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HMG20BQ9P0W2 EML3-212ENST00000494176 2901 ntTSL 2 BASIC20.99■□□□□ 0.95
HMG20BQ9P0W2 EML3-216ENST00000529309 2909 ntTSL 2 BASIC20.99■□□□□ 0.95
HMG20BQ9P0W2 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HMG20BQ9P0W2 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
HMG20BQ9P0W2 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
HMG20BQ9P0W2 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HMG20BQ9P0W2 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
HMG20BQ9P0W2 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC20.99■□□□□ 0.95
HMG20BQ9P0W2 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HMG20BQ9P0W2 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC20.99■□□□□ 0.95
HMG20BQ9P0W2 COX10-202ENST00000429152 875 ntTSL 2 BASIC20.99■□□□□ 0.95
HMG20BQ9P0W2 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC20.99■□□□□ 0.95
HMG20BQ9P0W2 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC20.99■□□□□ 0.95
HMG20BQ9P0W2 OR7E47P-204ENST00000575924 449 ntBASIC20.99■□□□□ 0.95
HMG20BQ9P0W2 TCAP-202ENST00000578283 583 ntTSL 5 BASIC20.99■□□□□ 0.95
HMG20BQ9P0W2 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
HMG20BQ9P0W2 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HMG20BQ9P0W2 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
HMG20BQ9P0W2 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
HMG20BQ9P0W2 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms