Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PHACTR1Q9C0D0 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PHACTR1Q9C0D0 CYP2T1P-202ENST00000641596 2535 ntBASIC17.57■□□□□ 0.4
PHACTR1Q9C0D0 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PHACTR1Q9C0D0 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PHACTR1Q9C0D0 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PHACTR1Q9C0D0 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PHACTR1Q9C0D0 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PHACTR1Q9C0D0 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.57■□□□□ 0.4
PHACTR1Q9C0D0 FRMD8P1-201ENST00000440433 1524 ntBASIC17.57■□□□□ 0.4
PHACTR1Q9C0D0 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.56■□□□□ 0.4
PHACTR1Q9C0D0 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.56■□□□□ 0.4
PHACTR1Q9C0D0 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.56■□□□□ 0.4
PHACTR1Q9C0D0 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
PHACTR1Q9C0D0 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.56■□□□□ 0.4
PHACTR1Q9C0D0 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.56■□□□□ 0.4
PHACTR1Q9C0D0 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PHACTR1Q9C0D0 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
PHACTR1Q9C0D0 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PHACTR1Q9C0D0 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PHACTR1Q9C0D0 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PHACTR1Q9C0D0 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PHACTR1Q9C0D0 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PHACTR1Q9C0D0 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
PHACTR1Q9C0D0 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PHACTR1Q9C0D0 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PHACTR1Q9C0D0 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
PHACTR1Q9C0D0 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
PHACTR1Q9C0D0 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
PHACTR1Q9C0D0 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PHACTR1Q9C0D0 TERF1P1-201ENST00000311003 1181 ntBASIC17.56■□□□□ 0.4
PHACTR1Q9C0D0 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PHACTR1Q9C0D0 AC211429.1-201ENST00000415277 523 ntBASIC17.56■□□□□ 0.4
PHACTR1Q9C0D0 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.56■□□□□ 0.4
PHACTR1Q9C0D0 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PHACTR1Q9C0D0 AL137013.1-201ENST00000432946 1228 ntBASIC17.56■□□□□ 0.4
PHACTR1Q9C0D0 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.56■□□□□ 0.4
PHACTR1Q9C0D0 GUSBP12-201ENST00000513727 720 ntBASIC17.56■□□□□ 0.4
PHACTR1Q9C0D0 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PHACTR1Q9C0D0 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PHACTR1Q9C0D0 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
PHACTR1Q9C0D0 LINC01023-201ENST00000606054 436 ntBASIC17.56■□□□□ 0.4
PHACTR1Q9C0D0 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PHACTR1Q9C0D0 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PHACTR1Q9C0D0 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.56■□□□□ 0.4
PHACTR1Q9C0D0 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
PHACTR1Q9C0D0 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.56■□□□□ 0.4
PHACTR1Q9C0D0 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.56■□□□□ 0.4
PHACTR1Q9C0D0 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PHACTR1Q9C0D0 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PHACTR1Q9C0D0 AL162727.3-201ENST00000635661 2787 ntBASIC17.56■□□□□ 0.4
PHACTR1Q9C0D0 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PHACTR1Q9C0D0 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.56■□□□□ 0.4
PHACTR1Q9C0D0 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
PHACTR1Q9C0D0 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.56■□□□□ 0.4
PHACTR1Q9C0D0 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.55■□□□□ 0.4
PHACTR1Q9C0D0 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PHACTR1Q9C0D0 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PHACTR1Q9C0D0 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PHACTR1Q9C0D0 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.55■□□□□ 0.4
PHACTR1Q9C0D0 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PHACTR1Q9C0D0 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PHACTR1Q9C0D0 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PHACTR1Q9C0D0 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PHACTR1Q9C0D0 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PHACTR1Q9C0D0 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.55■□□□□ 0.4
PHACTR1Q9C0D0 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.55■□□□□ 0.4
PHACTR1Q9C0D0 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PHACTR1Q9C0D0 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PHACTR1Q9C0D0 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PHACTR1Q9C0D0 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PHACTR1Q9C0D0 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PHACTR1Q9C0D0 AC009336.1-201ENST00000608941 1553 ntBASIC17.55■□□□□ 0.4
PHACTR1Q9C0D0 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PHACTR1Q9C0D0 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PHACTR1Q9C0D0 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PHACTR1Q9C0D0 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PHACTR1Q9C0D0 TSPY5P-201ENST00000426936 936 ntBASIC17.55■□□□□ 0.4
PHACTR1Q9C0D0 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.55■□□□□ 0.4
PHACTR1Q9C0D0 AC112907.2-201ENST00000448639 330 ntBASIC17.55■□□□□ 0.4
PHACTR1Q9C0D0 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.55■□□□□ 0.4
PHACTR1Q9C0D0 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.55■□□□□ 0.4
PHACTR1Q9C0D0 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
PHACTR1Q9C0D0 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.55■□□□□ 0.4
PHACTR1Q9C0D0 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PHACTR1Q9C0D0 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
PHACTR1Q9C0D0 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PHACTR1Q9C0D0 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PHACTR1Q9C0D0 GPR89P-201ENST00000407924 1495 ntBASIC17.55■□□□□ 0.4
PHACTR1Q9C0D0 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.55■□□□□ 0.4
PHACTR1Q9C0D0 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PHACTR1Q9C0D0 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.55■□□□□ 0.4
PHACTR1Q9C0D0 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.55■□□□□ 0.4
PHACTR1Q9C0D0 KRT8P10-201ENST00000450021 1447 ntBASIC17.55■□□□□ 0.4
PHACTR1Q9C0D0 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PHACTR1Q9C0D0 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.54■□□□□ 0.4
PHACTR1Q9C0D0 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PHACTR1Q9C0D0 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PHACTR1Q9C0D0 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
PHACTR1Q9C0D0 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms