Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CASD1Q96PB1 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.31■□□□□ 0.52
CASD1Q96PB1 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CASD1Q96PB1 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC18.31■□□□□ 0.52
CASD1Q96PB1 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.31■□□□□ 0.52
CASD1Q96PB1 FAM86GP-201ENST00000448322 971 ntBASIC18.31■□□□□ 0.52
CASD1Q96PB1 Z92544.3-201ENST00000624747 417 ntBASIC18.31■□□□□ 0.52
CASD1Q96PB1 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CASD1Q96PB1 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.31■□□□□ 0.52
CASD1Q96PB1 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CASD1Q96PB1 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CASD1Q96PB1 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.31■□□□□ 0.52
CASD1Q96PB1 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.31■□□□□ 0.52
CASD1Q96PB1 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CASD1Q96PB1 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CASD1Q96PB1 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CASD1Q96PB1 AC135050.7-201ENST00000624508 2218 ntBASIC18.3■□□□□ 0.52
CASD1Q96PB1 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.3■□□□□ 0.52
CASD1Q96PB1 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.3■□□□□ 0.52
CASD1Q96PB1 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.3■□□□□ 0.52
CASD1Q96PB1 AC012569.1-201ENST00000591191 1524 ntBASIC18.3■□□□□ 0.52
CASD1Q96PB1 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.3■□□□□ 0.52
CASD1Q96PB1 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CASD1Q96PB1 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.3■□□□□ 0.52
CASD1Q96PB1 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.3■□□□□ 0.52
CASD1Q96PB1 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CASD1Q96PB1 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CASD1Q96PB1 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CASD1Q96PB1 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CASD1Q96PB1 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC18.3■□□□□ 0.52
CASD1Q96PB1 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CASD1Q96PB1 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CASD1Q96PB1 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC18.3■□□□□ 0.52
CASD1Q96PB1 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CASD1Q96PB1 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.3■□□□□ 0.52
CASD1Q96PB1 AC069335.1-201ENST00000489972 472 ntBASIC18.3■□□□□ 0.52
CASD1Q96PB1 AL390955.2-201ENST00000603032 514 ntBASIC18.3■□□□□ 0.52
CASD1Q96PB1 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC18.3■□□□□ 0.52
CASD1Q96PB1 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.3■□□□□ 0.52
CASD1Q96PB1 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CASD1Q96PB1 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.3■□□□□ 0.52
CASD1Q96PB1 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CASD1Q96PB1 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CASD1Q96PB1 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
CASD1Q96PB1 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CASD1Q96PB1 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
CASD1Q96PB1 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CASD1Q96PB1 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CASD1Q96PB1 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CASD1Q96PB1 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CASD1Q96PB1 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CASD1Q96PB1 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CASD1Q96PB1 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CASD1Q96PB1 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CASD1Q96PB1 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CASD1Q96PB1 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC18.29■□□□□ 0.52
CASD1Q96PB1 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC18.29■□□□□ 0.52
CASD1Q96PB1 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CASD1Q96PB1 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CASD1Q96PB1 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.29■□□□□ 0.52
CASD1Q96PB1 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.29■□□□□ 0.52
CASD1Q96PB1 AL009183.1-201ENST00000603760 355 ntBASIC18.29■□□□□ 0.52
CASD1Q96PB1 AL161645.1-201ENST00000622716 1255 ntBASIC18.29■□□□□ 0.52
CASD1Q96PB1 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CASD1Q96PB1 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CASD1Q96PB1 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CASD1Q96PB1 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CASD1Q96PB1 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CASD1Q96PB1 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CASD1Q96PB1 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.29■□□□□ 0.52
CASD1Q96PB1 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.29■□□□□ 0.52
CASD1Q96PB1 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CASD1Q96PB1 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CASD1Q96PB1 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CASD1Q96PB1 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CASD1Q96PB1 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.28■□□□□ 0.52
CASD1Q96PB1 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CASD1Q96PB1 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CASD1Q96PB1 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC18.28■□□□□ 0.52
CASD1Q96PB1 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CASD1Q96PB1 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
CASD1Q96PB1 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CASD1Q96PB1 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CASD1Q96PB1 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC18.28■□□□□ 0.52
CASD1Q96PB1 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC18.28■□□□□ 0.52
CASD1Q96PB1 GPS2P2-201ENST00000430745 888 ntBASIC18.28■□□□□ 0.52
CASD1Q96PB1 SPCS2P4-201ENST00000436160 681 ntBASIC18.28■□□□□ 0.52
CASD1Q96PB1 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CASD1Q96PB1 VPS29-207ENST00000549970 818 ntTSL 3 BASIC18.28■□□□□ 0.52
CASD1Q96PB1 TSFM-210ENST00000550559 897 ntTSL 5 BASIC18.28■□□□□ 0.52
CASD1Q96PB1 DUX4L27-201ENST00000554796 1261 ntBASIC18.28■□□□□ 0.52
CASD1Q96PB1 DUT-210ENST00000559935 569 ntTSL 3 BASIC18.28■□□□□ 0.52
CASD1Q96PB1 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CASD1Q96PB1 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CASD1Q96PB1 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.28■□□□□ 0.52
CASD1Q96PB1 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CASD1Q96PB1 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.28■□□□□ 0.52
CASD1Q96PB1 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
CASD1Q96PB1 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.28■□□□□ 0.52
CASD1Q96PB1 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms