Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.83■□□□□ 0.44
RPRD1AQ96P16 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
RPRD1AQ96P16 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
RPRD1AQ96P16 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RPRD1AQ96P16 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.83■□□□□ 0.44
RPRD1AQ96P16 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RPRD1AQ96P16 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
RPRD1AQ96P16 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RPRD1AQ96P16 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RPRD1AQ96P16 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.83■□□□□ 0.44
RPRD1AQ96P16 AC006504.4-201ENST00000592118 1568 ntBASIC17.83■□□□□ 0.44
RPRD1AQ96P16 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.82■□□□□ 0.44
RPRD1AQ96P16 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
RPRD1AQ96P16 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
RPRD1AQ96P16 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RPRD1AQ96P16 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
RPRD1AQ96P16 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RPRD1AQ96P16 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.82■□□□□ 0.44
RPRD1AQ96P16 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RPRD1AQ96P16 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RPRD1AQ96P16 AC073621.1-201ENST00000392730 636 ntBASIC17.82■□□□□ 0.44
RPRD1AQ96P16 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.82■□□□□ 0.44
RPRD1AQ96P16 AC136632.2-201ENST00000512891 861 ntBASIC17.82■□□□□ 0.44
RPRD1AQ96P16 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.82■□□□□ 0.44
RPRD1AQ96P16 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RPRD1AQ96P16 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.82■□□□□ 0.44
RPRD1AQ96P16 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.82■□□□□ 0.44
RPRD1AQ96P16 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.82■□□□□ 0.44
RPRD1AQ96P16 BX640515.1-201ENST00000617215 977 ntBASIC17.82■□□□□ 0.44
RPRD1AQ96P16 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.82■□□□□ 0.44
RPRD1AQ96P16 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RPRD1AQ96P16 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
RPRD1AQ96P16 PCDHB18P-201ENST00000524813 2368 ntBASIC17.82■□□□□ 0.44
RPRD1AQ96P16 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RPRD1AQ96P16 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.82■□□□□ 0.44
RPRD1AQ96P16 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
RPRD1AQ96P16 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RPRD1AQ96P16 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
RPRD1AQ96P16 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RPRD1AQ96P16 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
RPRD1AQ96P16 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RPRD1AQ96P16 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.81■□□□□ 0.44
RPRD1AQ96P16 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
RPRD1AQ96P16 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RPRD1AQ96P16 AC016396.2-201ENST00000562575 1417 ntBASIC17.81■□□□□ 0.44
RPRD1AQ96P16 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RPRD1AQ96P16 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.81■□□□□ 0.44
RPRD1AQ96P16 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RPRD1AQ96P16 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RPRD1AQ96P16 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RPRD1AQ96P16 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RPRD1AQ96P16 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.81■□□□□ 0.44
RPRD1AQ96P16 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RPRD1AQ96P16 AC098831.1-202ENST00000438821 336 ntBASIC17.81■□□□□ 0.44
RPRD1AQ96P16 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.81■□□□□ 0.44
RPRD1AQ96P16 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.81■□□□□ 0.44
RPRD1AQ96P16 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RPRD1AQ96P16 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.81■□□□□ 0.44
RPRD1AQ96P16 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
RPRD1AQ96P16 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.81■□□□□ 0.44
RPRD1AQ96P16 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RPRD1AQ96P16 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RPRD1AQ96P16 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
RPRD1AQ96P16 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RPRD1AQ96P16 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RPRD1AQ96P16 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RPRD1AQ96P16 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.81■□□□□ 0.44
RPRD1AQ96P16 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
RPRD1AQ96P16 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.81■□□□□ 0.44
RPRD1AQ96P16 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
RPRD1AQ96P16 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.81■□□□□ 0.44
RPRD1AQ96P16 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPRD1AQ96P16 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.8■□□□□ 0.44
RPRD1AQ96P16 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.8■□□□□ 0.44
RPRD1AQ96P16 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
RPRD1AQ96P16 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.8■□□□□ 0.44
RPRD1AQ96P16 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.8■□□□□ 0.44
RPRD1AQ96P16 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPRD1AQ96P16 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPRD1AQ96P16 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.8■□□□□ 0.44
RPRD1AQ96P16 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
RPRD1AQ96P16 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
RPRD1AQ96P16 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.8■□□□□ 0.44
RPRD1AQ96P16 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.8■□□□□ 0.44
RPRD1AQ96P16 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RPRD1AQ96P16 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.8■□□□□ 0.44
RPRD1AQ96P16 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPRD1AQ96P16 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPRD1AQ96P16 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.8■□□□□ 0.44
RPRD1AQ96P16 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.8■□□□□ 0.44
RPRD1AQ96P16 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.8■□□□□ 0.44
RPRD1AQ96P16 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.8■□□□□ 0.44
RPRD1AQ96P16 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
RPRD1AQ96P16 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPRD1AQ96P16 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.8■□□□□ 0.44
RPRD1AQ96P16 AC117500.6-201ENST00000624871 588 ntBASIC17.8■□□□□ 0.44
RPRD1AQ96P16 AC005593.1-201ENST00000624894 515 ntBASIC17.8■□□□□ 0.44
RPRD1AQ96P16 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.8■□□□□ 0.44
RPRD1AQ96P16 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPRD1AQ96P16 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms