Protein–RNA interactions for Protein: Q96MT7

CFAP44, Cilia- and flagella-associated protein 44, humanhuman

Predictions only

Length 982 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP44Q96MT7 PCDHB18P-201ENST00000524813 2368 ntBASIC22.43■■□□□ 1.18
CFAP44Q96MT7 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CFAP44Q96MT7 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CFAP44Q96MT7 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CFAP44Q96MT7 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
CFAP44Q96MT7 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CFAP44Q96MT7 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
CFAP44Q96MT7 AC020916.1-201ENST00000587762 1774 ntBASIC22.43■■□□□ 1.18
CFAP44Q96MT7 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC22.43■■□□□ 1.18
CFAP44Q96MT7 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
CFAP44Q96MT7 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
CFAP44Q96MT7 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CFAP44Q96MT7 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CFAP44Q96MT7 AC116353.5-201ENST00000638148 1699 ntBASIC22.42■■□□□ 1.18
CFAP44Q96MT7 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC22.42■■□□□ 1.18
CFAP44Q96MT7 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CFAP44Q96MT7 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC22.42■■□□□ 1.18
CFAP44Q96MT7 AC009947.1-201ENST00000444350 727 ntBASIC22.42■■□□□ 1.18
CFAP44Q96MT7 IGHV3-65-201ENST00000523210 341 ntBASIC22.42■■□□□ 1.18
CFAP44Q96MT7 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC22.42■■□□□ 1.18
CFAP44Q96MT7 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC22.42■■□□□ 1.18
CFAP44Q96MT7 TERC-201ENST00000602385 541 ntBASIC22.42■■□□□ 1.18
CFAP44Q96MT7 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CFAP44Q96MT7 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC22.42■■□□□ 1.18
CFAP44Q96MT7 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CFAP44Q96MT7 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CFAP44Q96MT7 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
CFAP44Q96MT7 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC22.42■■□□□ 1.18
CFAP44Q96MT7 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CFAP44Q96MT7 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CFAP44Q96MT7 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC22.42■■□□□ 1.18
CFAP44Q96MT7 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC22.41■■□□□ 1.18
CFAP44Q96MT7 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
CFAP44Q96MT7 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC22.41■■□□□ 1.18
CFAP44Q96MT7 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CFAP44Q96MT7 CROCCP2-202ENST00000412962 2773 ntBASIC22.41■■□□□ 1.18
CFAP44Q96MT7 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CFAP44Q96MT7 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC22.41■■□□□ 1.18
CFAP44Q96MT7 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CFAP44Q96MT7 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC22.41■■□□□ 1.18
CFAP44Q96MT7 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CFAP44Q96MT7 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CFAP44Q96MT7 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CFAP44Q96MT7 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
CFAP44Q96MT7 AP002414.1-201ENST00000391405 1147 ntBASIC22.41■■□□□ 1.18
CFAP44Q96MT7 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC22.41■■□□□ 1.18
CFAP44Q96MT7 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC22.41■■□□□ 1.18
CFAP44Q96MT7 CIPC-205ENST00000555437 566 ntTSL 3 BASIC22.41■■□□□ 1.18
CFAP44Q96MT7 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CFAP44Q96MT7 AL671883.3-201ENST00000603274 991 ntBASIC22.41■■□□□ 1.18
CFAP44Q96MT7 Z83851.2-201ENST00000609564 659 ntBASIC22.41■■□□□ 1.18
CFAP44Q96MT7 HOTTIP_1.1-201ENST00000620415 57 ntBASIC22.41■■□□□ 1.18
CFAP44Q96MT7 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
CFAP44Q96MT7 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC22.41■■□□□ 1.18
CFAP44Q96MT7 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CFAP44Q96MT7 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CFAP44Q96MT7 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
CFAP44Q96MT7 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CFAP44Q96MT7 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
CFAP44Q96MT7 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
CFAP44Q96MT7 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
CFAP44Q96MT7 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC22.4■■□□□ 1.18
CFAP44Q96MT7 AC104109.2-201ENST00000602919 1418 ntBASIC22.4■■□□□ 1.18
CFAP44Q96MT7 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
CFAP44Q96MT7 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
CFAP44Q96MT7 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
CFAP44Q96MT7 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
CFAP44Q96MT7 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CFAP44Q96MT7 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CFAP44Q96MT7 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
CFAP44Q96MT7 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC22.4■■□□□ 1.18
CFAP44Q96MT7 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC22.4■■□□□ 1.18
CFAP44Q96MT7 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CFAP44Q96MT7 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC22.4■■□□□ 1.18
CFAP44Q96MT7 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
CFAP44Q96MT7 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
CFAP44Q96MT7 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CFAP44Q96MT7 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
CFAP44Q96MT7 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
CFAP44Q96MT7 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
CFAP44Q96MT7 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC22.4■■□□□ 1.18
CFAP44Q96MT7 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
CFAP44Q96MT7 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
CFAP44Q96MT7 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
CFAP44Q96MT7 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.18
CFAP44Q96MT7 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC22.39■■□□□ 1.18
CFAP44Q96MT7 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC22.39■■□□□ 1.18
CFAP44Q96MT7 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
CFAP44Q96MT7 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
CFAP44Q96MT7 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
CFAP44Q96MT7 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CFAP44Q96MT7 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CFAP44Q96MT7 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC22.39■■□□□ 1.17
CFAP44Q96MT7 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CFAP44Q96MT7 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CFAP44Q96MT7 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC22.39■■□□□ 1.17
CFAP44Q96MT7 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC22.39■■□□□ 1.17
CFAP44Q96MT7 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC22.39■■□□□ 1.17
CFAP44Q96MT7 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CFAP44Q96MT7 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms