Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AC005332.8-201ENST00000622750 2735 ntBASIC17.25■□□□□ 0.35
ECHDC3Q96DC8 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
ECHDC3Q96DC8 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ECHDC3Q96DC8 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ECHDC3Q96DC8 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
ECHDC3Q96DC8 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ECHDC3Q96DC8 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ECHDC3Q96DC8 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ECHDC3Q96DC8 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.24■□□□□ 0.35
ECHDC3Q96DC8 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ECHDC3Q96DC8 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ECHDC3Q96DC8 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ECHDC3Q96DC8 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ECHDC3Q96DC8 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ECHDC3Q96DC8 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ECHDC3Q96DC8 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ECHDC3Q96DC8 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ECHDC3Q96DC8 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
ECHDC3Q96DC8 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
ECHDC3Q96DC8 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
ECHDC3Q96DC8 OR7E47P-204ENST00000575924 449 ntBASIC17.24■□□□□ 0.35
ECHDC3Q96DC8 AC004790.2-201ENST00000623588 572 ntBASIC17.24■□□□□ 0.35
ECHDC3Q96DC8 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.24■□□□□ 0.35
ECHDC3Q96DC8 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
ECHDC3Q96DC8 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
ECHDC3Q96DC8 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ECHDC3Q96DC8 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
ECHDC3Q96DC8 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ECHDC3Q96DC8 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ECHDC3Q96DC8 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
ECHDC3Q96DC8 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.24■□□□□ 0.35
ECHDC3Q96DC8 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
ECHDC3Q96DC8 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ECHDC3Q96DC8 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ECHDC3Q96DC8 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ECHDC3Q96DC8 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ECHDC3Q96DC8 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
ECHDC3Q96DC8 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ECHDC3Q96DC8 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
ECHDC3Q96DC8 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ECHDC3Q96DC8 AC139713.2-201ENST00000641328 2723 ntBASIC17.23■□□□□ 0.35
ECHDC3Q96DC8 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ECHDC3Q96DC8 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.23■□□□□ 0.35
ECHDC3Q96DC8 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
ECHDC3Q96DC8 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.23■□□□□ 0.35
ECHDC3Q96DC8 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
ECHDC3Q96DC8 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ECHDC3Q96DC8 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ECHDC3Q96DC8 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ECHDC3Q96DC8 MRPL20P1-201ENST00000400819 433 ntBASIC17.23■□□□□ 0.35
ECHDC3Q96DC8 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ECHDC3Q96DC8 PMS2P1-201ENST00000431037 1228 ntBASIC17.23■□□□□ 0.35
ECHDC3Q96DC8 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.23■□□□□ 0.35
ECHDC3Q96DC8 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
ECHDC3Q96DC8 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.23■□□□□ 0.35
ECHDC3Q96DC8 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.23■□□□□ 0.35
ECHDC3Q96DC8 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.23■□□□□ 0.35
ECHDC3Q96DC8 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.23■□□□□ 0.35
ECHDC3Q96DC8 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.23■□□□□ 0.35
ECHDC3Q96DC8 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ECHDC3Q96DC8 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
ECHDC3Q96DC8 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ECHDC3Q96DC8 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
ECHDC3Q96DC8 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
ECHDC3Q96DC8 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.23■□□□□ 0.35
ECHDC3Q96DC8 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.23■□□□□ 0.35
ECHDC3Q96DC8 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
ECHDC3Q96DC8 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ECHDC3Q96DC8 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ECHDC3Q96DC8 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.23■□□□□ 0.35
ECHDC3Q96DC8 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ECHDC3Q96DC8 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
ECHDC3Q96DC8 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ECHDC3Q96DC8 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ECHDC3Q96DC8 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ECHDC3Q96DC8 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
ECHDC3Q96DC8 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
ECHDC3Q96DC8 AL023806.1-201ENST00000603994 1649 ntBASIC17.22■□□□□ 0.35
ECHDC3Q96DC8 LINC02012-201ENST00000608206 1725 ntBASIC17.22■□□□□ 0.35
ECHDC3Q96DC8 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
ECHDC3Q96DC8 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ECHDC3Q96DC8 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ECHDC3Q96DC8 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ECHDC3Q96DC8 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
ECHDC3Q96DC8 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ECHDC3Q96DC8 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ECHDC3Q96DC8 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
ECHDC3Q96DC8 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
ECHDC3Q96DC8 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
ECHDC3Q96DC8 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ECHDC3Q96DC8 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.22■□□□□ 0.35
ECHDC3Q96DC8 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.22■□□□□ 0.35
ECHDC3Q96DC8 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.22■□□□□ 0.35
ECHDC3Q96DC8 AC087163.2-201ENST00000457299 853 ntBASIC17.22■□□□□ 0.35
ECHDC3Q96DC8 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
ECHDC3Q96DC8 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.22■□□□□ 0.35
ECHDC3Q96DC8 AC010654.1-201ENST00000615722 808 ntBASIC17.22■□□□□ 0.35
ECHDC3Q96DC8 FAM197Y3-203ENST00000618346 717 ntBASIC17.22■□□□□ 0.35
ECHDC3Q96DC8 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ECHDC3Q96DC8 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms