Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM43Q96BQ3 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM43Q96BQ3 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM43Q96BQ3 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.59■□□□□ 0.57
TRIM43Q96BQ3 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM43Q96BQ3 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC18.59■□□□□ 0.57
TRIM43Q96BQ3 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC18.59■□□□□ 0.57
TRIM43Q96BQ3 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
TRIM43Q96BQ3 PGF-202ENST00000405431 666 ntTSL 5 BASIC18.59■□□□□ 0.57
TRIM43Q96BQ3 PTPA-220ENST00000436883 532 ntTSL 4 BASIC18.59■□□□□ 0.57
TRIM43Q96BQ3 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC18.59■□□□□ 0.57
TRIM43Q96BQ3 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC18.59■□□□□ 0.57
TRIM43Q96BQ3 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC18.59■□□□□ 0.57
TRIM43Q96BQ3 HILS1-202ENST00000545329 423 ntBASIC18.59■□□□□ 0.57
TRIM43Q96BQ3 CDK4-206ENST00000549606 558 ntTSL 2 BASIC18.59■□□□□ 0.57
TRIM43Q96BQ3 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC18.59■□□□□ 0.57
TRIM43Q96BQ3 TP53TG3HP-202ENST00000569755 579 ntBASIC18.59■□□□□ 0.57
TRIM43Q96BQ3 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM43Q96BQ3 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC18.59■□□□□ 0.57
TRIM43Q96BQ3 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC18.59■□□□□ 0.57
TRIM43Q96BQ3 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
TRIM43Q96BQ3 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM43Q96BQ3 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
TRIM43Q96BQ3 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC18.59■□□□□ 0.57
TRIM43Q96BQ3 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.59■□□□□ 0.57
TRIM43Q96BQ3 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM43Q96BQ3 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM43Q96BQ3 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM43Q96BQ3 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRIM43Q96BQ3 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRIM43Q96BQ3 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRIM43Q96BQ3 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.57
TRIM43Q96BQ3 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRIM43Q96BQ3 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.58■□□□□ 0.57
TRIM43Q96BQ3 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.58■□□□□ 0.57
TRIM43Q96BQ3 AC138932.1-201ENST00000534164 6830 ntBASIC18.58■□□□□ 0.57
TRIM43Q96BQ3 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TRIM43Q96BQ3 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.58■□□□□ 0.57
TRIM43Q96BQ3 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC18.58■□□□□ 0.57
TRIM43Q96BQ3 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
TRIM43Q96BQ3 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.58■□□□□ 0.57
TRIM43Q96BQ3 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM43Q96BQ3 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM43Q96BQ3 HNRNPA3P1-201ENST00000401429 1139 ntBASIC18.58■□□□□ 0.56
TRIM43Q96BQ3 HNRNPA3P5-201ENST00000455201 833 ntBASIC18.58■□□□□ 0.56
TRIM43Q96BQ3 GPR53P-205ENST00000457298 1084 ntBASIC18.58■□□□□ 0.56
TRIM43Q96BQ3 AC010336.2-201ENST00000564226 506 ntBASIC18.58■□□□□ 0.56
TRIM43Q96BQ3 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC18.58■□□□□ 0.56
TRIM43Q96BQ3 AL139327.4-201ENST00000612362 153 ntBASIC18.58■□□□□ 0.56
TRIM43Q96BQ3 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC18.58■□□□□ 0.56
TRIM43Q96BQ3 AL138828.2-201ENST00000615812 383 ntBASIC18.58■□□□□ 0.56
TRIM43Q96BQ3 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM43Q96BQ3 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM43Q96BQ3 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM43Q96BQ3 AC073130.3-201ENST00000624389 2278 ntBASIC18.58■□□□□ 0.56
TRIM43Q96BQ3 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.58■□□□□ 0.56
TRIM43Q96BQ3 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.58■□□□□ 0.56
TRIM43Q96BQ3 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
TRIM43Q96BQ3 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM43Q96BQ3 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM43Q96BQ3 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM43Q96BQ3 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM43Q96BQ3 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.57■□□□□ 0.56
TRIM43Q96BQ3 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
TRIM43Q96BQ3 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM43Q96BQ3 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM43Q96BQ3 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM43Q96BQ3 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM43Q96BQ3 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.57■□□□□ 0.56
TRIM43Q96BQ3 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC18.57■□□□□ 0.56
TRIM43Q96BQ3 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
TRIM43Q96BQ3 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC18.57■□□□□ 0.56
TRIM43Q96BQ3 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM43Q96BQ3 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
TRIM43Q96BQ3 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.57■□□□□ 0.56
TRIM43Q96BQ3 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM43Q96BQ3 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM43Q96BQ3 REEP4-207ENST00000523293 913 ntTSL 3 BASIC18.57■□□□□ 0.56
TRIM43Q96BQ3 AL138918.1-201ENST00000568306 659 ntBASIC18.57■□□□□ 0.56
TRIM43Q96BQ3 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.57■□□□□ 0.56
TRIM43Q96BQ3 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC18.57■□□□□ 0.56
TRIM43Q96BQ3 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM43Q96BQ3 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.57■□□□□ 0.56
TRIM43Q96BQ3 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM43Q96BQ3 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM43Q96BQ3 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.57■□□□□ 0.56
TRIM43Q96BQ3 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.56■□□□□ 0.56
TRIM43Q96BQ3 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM43Q96BQ3 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.56■□□□□ 0.56
TRIM43Q96BQ3 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM43Q96BQ3 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC18.56■□□□□ 0.56
TRIM43Q96BQ3 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM43Q96BQ3 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.56■□□□□ 0.56
TRIM43Q96BQ3 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM43Q96BQ3 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC18.56■□□□□ 0.56
TRIM43Q96BQ3 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.56■□□□□ 0.56
TRIM43Q96BQ3 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
TRIM43Q96BQ3 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM43Q96BQ3 MPI-209ENST00000564003 1195 ntTSL 2 BASIC18.56■□□□□ 0.56
TRIM43Q96BQ3 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms