Protein–RNA interactions for Protein: Q969H4

CNKSR1, Connector enhancer of kinase suppressor of ras 1, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1Q969H4 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CNKSR1Q969H4 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CNKSR1Q969H4 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
CNKSR1Q969H4 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CNKSR1Q969H4 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CNKSR1Q969H4 NME2P1-201ENST00000426182 414 ntBASIC20.98■□□□□ 0.95
CNKSR1Q969H4 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC20.98■□□□□ 0.95
CNKSR1Q969H4 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CNKSR1Q969H4 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC20.98■□□□□ 0.95
CNKSR1Q969H4 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC20.98■□□□□ 0.95
CNKSR1Q969H4 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC20.98■□□□□ 0.95
CNKSR1Q969H4 AL359881.2-201ENST00000602973 570 ntBASIC20.98■□□□□ 0.95
CNKSR1Q969H4 LINC01451-201ENST00000623792 534 ntBASIC20.98■□□□□ 0.95
CNKSR1Q969H4 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CNKSR1Q969H4 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CNKSR1Q969H4 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CNKSR1Q969H4 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CNKSR1Q969H4 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CNKSR1Q969H4 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC20.98■□□□□ 0.95
CNKSR1Q969H4 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.98■□□□□ 0.95
CNKSR1Q969H4 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CNKSR1Q969H4 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC20.97■□□□□ 0.95
CNKSR1Q969H4 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNKSR1Q969H4 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNKSR1Q969H4 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNKSR1Q969H4 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
CNKSR1Q969H4 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC20.97■□□□□ 0.95
CNKSR1Q969H4 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CNKSR1Q969H4 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.97■□□□□ 0.95
CNKSR1Q969H4 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNKSR1Q969H4 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
CNKSR1Q969H4 AL353732.1-201ENST00000569618 1459 ntBASIC20.97■□□□□ 0.95
CNKSR1Q969H4 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC20.97■□□□□ 0.95
CNKSR1Q969H4 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC20.97■□□□□ 0.95
CNKSR1Q969H4 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC20.97■□□□□ 0.95
CNKSR1Q969H4 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CNKSR1Q969H4 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CNKSR1Q969H4 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC20.97■□□□□ 0.95
CNKSR1Q969H4 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CNKSR1Q969H4 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNKSR1Q969H4 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
CNKSR1Q969H4 AL596325.1-201ENST00000563991 1082 ntBASIC20.97■□□□□ 0.95
CNKSR1Q969H4 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC20.97■□□□□ 0.95
CNKSR1Q969H4 MIR4453-201ENST00000584019 89 ntBASIC20.97■□□□□ 0.95
CNKSR1Q969H4 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CNKSR1Q969H4 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC20.97■□□□□ 0.95
CNKSR1Q969H4 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNKSR1Q969H4 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC20.97■□□□□ 0.95
CNKSR1Q969H4 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNKSR1Q969H4 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNKSR1Q969H4 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC20.97■□□□□ 0.95
CNKSR1Q969H4 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNKSR1Q969H4 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNKSR1Q969H4 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CNKSR1Q969H4 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC20.97■□□□□ 0.95
CNKSR1Q969H4 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNKSR1Q969H4 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNKSR1Q969H4 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNKSR1Q969H4 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNKSR1Q969H4 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CNKSR1Q969H4 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
CNKSR1Q969H4 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNKSR1Q969H4 CD81-202ENST00000381036 880 ntTSL 3 BASIC20.96■□□□□ 0.95
CNKSR1Q969H4 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNKSR1Q969H4 MRPS18AP1-201ENST00000414458 589 ntBASIC20.96■□□□□ 0.95
CNKSR1Q969H4 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CNKSR1Q969H4 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC20.96■□□□□ 0.95
CNKSR1Q969H4 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CNKSR1Q969H4 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNKSR1Q969H4 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.96■□□□□ 0.95
CNKSR1Q969H4 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CNKSR1Q969H4 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNKSR1Q969H4 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
CNKSR1Q969H4 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC20.95■□□□□ 0.94
CNKSR1Q969H4 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CNKSR1Q969H4 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CNKSR1Q969H4 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CNKSR1Q969H4 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNKSR1Q969H4 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC20.95■□□□□ 0.94
CNKSR1Q969H4 HCG4-201ENST00000418983 998 ntBASIC20.95■□□□□ 0.94
CNKSR1Q969H4 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC20.95■□□□□ 0.94
CNKSR1Q969H4 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC20.95■□□□□ 0.94
CNKSR1Q969H4 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CNKSR1Q969H4 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
CNKSR1Q969H4 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC20.95■□□□□ 0.94
CNKSR1Q969H4 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC20.95■□□□□ 0.94
CNKSR1Q969H4 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNKSR1Q969H4 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CNKSR1Q969H4 TDG-209ENST00000544861 1387 ntTSL 2 BASIC20.95■□□□□ 0.94
CNKSR1Q969H4 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.95■□□□□ 0.94
CNKSR1Q969H4 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC20.95■□□□□ 0.94
CNKSR1Q969H4 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNKSR1Q969H4 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNKSR1Q969H4 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNKSR1Q969H4 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNKSR1Q969H4 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNKSR1Q969H4 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNKSR1Q969H4 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.94■□□□□ 0.94
CNKSR1Q969H4 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNKSR1Q969H4 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms