Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.02□□□□□ -0.01
CCDC107Q8WV48 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.02□□□□□ -0.01
CCDC107Q8WV48 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
CCDC107Q8WV48 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC107Q8WV48 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC107Q8WV48 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC107Q8WV48 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CCDC107Q8WV48 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC107Q8WV48 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
CCDC107Q8WV48 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC107Q8WV48 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.01□□□□□ -0.01
CCDC107Q8WV48 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.01□□□□□ -0.01
CCDC107Q8WV48 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC107Q8WV48 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC107Q8WV48 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC107Q8WV48 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC107Q8WV48 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CCDC107Q8WV48 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC107Q8WV48 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.01□□□□□ -0.01
CCDC107Q8WV48 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
CCDC107Q8WV48 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC107Q8WV48 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC107Q8WV48 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC107Q8WV48 AC022898.2-201ENST00000616822 1312 ntBASIC15.01□□□□□ -0.01
CCDC107Q8WV48 TSPY26P-202ENST00000565928 3884 ntBASIC15.01□□□□□ -0.01
CCDC107Q8WV48 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC107Q8WV48 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC107Q8WV48 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC15.01□□□□□ -0.01
CCDC107Q8WV48 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC107Q8WV48 SLC25A3P1-201ENST00000443844 931 ntBASIC15.01□□□□□ -0.01
CCDC107Q8WV48 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC107Q8WV48 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CCDC107Q8WV48 AC034232.1-201ENST00000506026 1064 ntBASIC15.01□□□□□ -0.01
CCDC107Q8WV48 RPS20-210ENST00000523936 899 ntTSL 2 BASIC15.01□□□□□ -0.01
CCDC107Q8WV48 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC15.01□□□□□ -0.01
CCDC107Q8WV48 AC008687.5-201ENST00000593746 558 ntBASIC15.01□□□□□ -0.01
CCDC107Q8WV48 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC15.01□□□□□ -0.01
CCDC107Q8WV48 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CCDC107Q8WV48 AL138966.2-201ENST00000621997 464 ntBASIC15.01□□□□□ -0.01
CCDC107Q8WV48 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC107Q8WV48 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC107Q8WV48 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CCDC107Q8WV48 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC107Q8WV48 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC107Q8WV48 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.01□□□□□ -0.01
CCDC107Q8WV48 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC107Q8WV48 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
CCDC107Q8WV48 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC107Q8WV48 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC107Q8WV48 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.01□□□□□ -0.01
CCDC107Q8WV48 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.01□□□□□ -0.01
CCDC107Q8WV48 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC107Q8WV48 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC107Q8WV48 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC107Q8WV48 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC107Q8WV48 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15□□□□□ -0.01
CCDC107Q8WV48 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC15□□□□□ -0.01
CCDC107Q8WV48 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCDC107Q8WV48 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15□□□□□ -0.01
CCDC107Q8WV48 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC107Q8WV48 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15□□□□□ -0.01
CCDC107Q8WV48 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC107Q8WV48 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
CCDC107Q8WV48 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCDC107Q8WV48 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15□□□□□ -0.01
CCDC107Q8WV48 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15□□□□□ -0.01
CCDC107Q8WV48 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC107Q8WV48 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15□□□□□ -0.01
CCDC107Q8WV48 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC107Q8WV48 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC107Q8WV48 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC107Q8WV48 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC107Q8WV48 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC107Q8WV48 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC15□□□□□ -0.01
CCDC107Q8WV48 GXYLT1P3-201ENST00000453058 1193 ntBASIC15□□□□□ -0.01
CCDC107Q8WV48 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCDC107Q8WV48 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC15□□□□□ -0.01
CCDC107Q8WV48 AC010203.1-204ENST00000548782 407 ntBASIC15□□□□□ -0.01
CCDC107Q8WV48 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC107Q8WV48 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC15□□□□□ -0.01
CCDC107Q8WV48 AC133561.5-201ENST00000635547 218 ntBASIC15□□□□□ -0.01
CCDC107Q8WV48 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC107Q8WV48 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC107Q8WV48 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC107Q8WV48 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC107Q8WV48 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC107Q8WV48 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15□□□□□ -0.01
CCDC107Q8WV48 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15□□□□□ -0.01
CCDC107Q8WV48 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCDC107Q8WV48 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC107Q8WV48 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15□□□□□ -0.01
CCDC107Q8WV48 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC15□□□□□ -0.01
CCDC107Q8WV48 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CCDC107Q8WV48 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC107Q8WV48 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CCDC107Q8WV48 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC107Q8WV48 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CCDC107Q8WV48 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.99□□□□□ -0.01
CCDC107Q8WV48 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC107Q8WV48 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms