Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SNED1Q8TER0 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SNED1Q8TER0 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC20.84■□□□□ 0.93
SNED1Q8TER0 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SNED1Q8TER0 AC069120.2-201ENST00000524091 540 ntBASIC20.84■□□□□ 0.93
SNED1Q8TER0 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC20.84■□□□□ 0.93
SNED1Q8TER0 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
SNED1Q8TER0 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SNED1Q8TER0 MIR6080-201ENST00000617359 66 ntBASIC20.84■□□□□ 0.93
SNED1Q8TER0 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SNED1Q8TER0 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC20.84■□□□□ 0.93
SNED1Q8TER0 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
SNED1Q8TER0 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
SNED1Q8TER0 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SNED1Q8TER0 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
SNED1Q8TER0 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.83■□□□□ 0.93
SNED1Q8TER0 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SNED1Q8TER0 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC20.83■□□□□ 0.93
SNED1Q8TER0 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SNED1Q8TER0 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC20.83■□□□□ 0.93
SNED1Q8TER0 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SNED1Q8TER0 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.83■□□□□ 0.93
SNED1Q8TER0 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC20.83■□□□□ 0.93
SNED1Q8TER0 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SNED1Q8TER0 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.83■□□□□ 0.93
SNED1Q8TER0 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SNED1Q8TER0 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SNED1Q8TER0 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SNED1Q8TER0 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
SNED1Q8TER0 MIR346-201ENST00000362234 95 ntBASIC20.83■□□□□ 0.93
SNED1Q8TER0 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SNED1Q8TER0 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SNED1Q8TER0 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SNED1Q8TER0 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
SNED1Q8TER0 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SNED1Q8TER0 COX5BP8-201ENST00000416911 349 ntBASIC20.83■□□□□ 0.93
SNED1Q8TER0 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC20.83■□□□□ 0.93
SNED1Q8TER0 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC20.83■□□□□ 0.93
SNED1Q8TER0 ALG1L8P-201ENST00000533887 760 ntBASIC20.83■□□□□ 0.93
SNED1Q8TER0 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC20.83■□□□□ 0.93
SNED1Q8TER0 COX11-202ENST00000571584 1108 ntTSL 2 BASIC20.83■□□□□ 0.93
SNED1Q8TER0 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
SNED1Q8TER0 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SNED1Q8TER0 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SNED1Q8TER0 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.83■□□□□ 0.92
SNED1Q8TER0 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SNED1Q8TER0 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
SNED1Q8TER0 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SNED1Q8TER0 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SNED1Q8TER0 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
SNED1Q8TER0 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
SNED1Q8TER0 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC20.82■□□□□ 0.92
SNED1Q8TER0 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.82■□□□□ 0.92
SNED1Q8TER0 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC20.82■□□□□ 0.92
SNED1Q8TER0 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SNED1Q8TER0 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SNED1Q8TER0 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SNED1Q8TER0 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SNED1Q8TER0 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SNED1Q8TER0 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC20.82■□□□□ 0.92
SNED1Q8TER0 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC20.82■□□□□ 0.92
SNED1Q8TER0 COQ9-214ENST00000567933 882 ntTSL 3 BASIC20.82■□□□□ 0.92
SNED1Q8TER0 MIR3909-201ENST00000579518 119 ntBASIC20.82■□□□□ 0.92
SNED1Q8TER0 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC20.82■□□□□ 0.92
SNED1Q8TER0 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
SNED1Q8TER0 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SNED1Q8TER0 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
SNED1Q8TER0 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SNED1Q8TER0 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SNED1Q8TER0 ABALON-201ENST00000629058 1903 ntBASIC20.82■□□□□ 0.92
SNED1Q8TER0 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SNED1Q8TER0 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SNED1Q8TER0 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SNED1Q8TER0 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
SNED1Q8TER0 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.82■□□□□ 0.92
SNED1Q8TER0 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SNED1Q8TER0 TDG-209ENST00000544861 1387 ntTSL 2 BASIC20.82■□□□□ 0.92
SNED1Q8TER0 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SNED1Q8TER0 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.82■□□□□ 0.92
SNED1Q8TER0 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SNED1Q8TER0 WASH6P-202ENST00000359512 1437 ntBASIC20.81■□□□□ 0.92
SNED1Q8TER0 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
SNED1Q8TER0 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC20.81■□□□□ 0.92
SNED1Q8TER0 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC20.81■□□□□ 0.92
SNED1Q8TER0 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.81■□□□□ 0.92
SNED1Q8TER0 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC20.81■□□□□ 0.92
SNED1Q8TER0 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
SNED1Q8TER0 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SNED1Q8TER0 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC20.81■□□□□ 0.92
SNED1Q8TER0 HNRNPA1P40-201ENST00000426371 1278 ntBASIC20.81■□□□□ 0.92
SNED1Q8TER0 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SNED1Q8TER0 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC20.81■□□□□ 0.92
SNED1Q8TER0 AC025048.6-201ENST00000634326 1161 ntBASIC20.81■□□□□ 0.92
SNED1Q8TER0 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SNED1Q8TER0 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SNED1Q8TER0 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC20.81■□□□□ 0.92
SNED1Q8TER0 AC138028.4-201ENST00000564984 1845 ntBASIC20.81■□□□□ 0.92
SNED1Q8TER0 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SNED1Q8TER0 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SNED1Q8TER0 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms