Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SIMC1Q8NDZ2 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.34■□□□□ 0.21
SIMC1Q8NDZ2 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.34■□□□□ 0.21
SIMC1Q8NDZ2 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.34■□□□□ 0.21
SIMC1Q8NDZ2 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.34■□□□□ 0.21
SIMC1Q8NDZ2 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.34■□□□□ 0.21
SIMC1Q8NDZ2 AL139327.4-201ENST00000612362 153 ntBASIC16.34■□□□□ 0.21
SIMC1Q8NDZ2 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.34■□□□□ 0.21
SIMC1Q8NDZ2 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.34■□□□□ 0.21
SIMC1Q8NDZ2 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SIMC1Q8NDZ2 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SIMC1Q8NDZ2 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SIMC1Q8NDZ2 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SIMC1Q8NDZ2 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
SIMC1Q8NDZ2 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SIMC1Q8NDZ2 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SIMC1Q8NDZ2 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SIMC1Q8NDZ2 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.34■□□□□ 0.21
SIMC1Q8NDZ2 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SIMC1Q8NDZ2 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SIMC1Q8NDZ2 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SIMC1Q8NDZ2 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SIMC1Q8NDZ2 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SIMC1Q8NDZ2 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SIMC1Q8NDZ2 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SIMC1Q8NDZ2 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
SIMC1Q8NDZ2 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.33■□□□□ 0.21
SIMC1Q8NDZ2 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.33■□□□□ 0.21
SIMC1Q8NDZ2 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SIMC1Q8NDZ2 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
SIMC1Q8NDZ2 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SIMC1Q8NDZ2 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SIMC1Q8NDZ2 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SIMC1Q8NDZ2 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SIMC1Q8NDZ2 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SIMC1Q8NDZ2 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SIMC1Q8NDZ2 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.2
SIMC1Q8NDZ2 AC103564.2-201ENST00000432853 1299 ntBASIC16.33■□□□□ 0.2
SIMC1Q8NDZ2 NUS1P1-201ENST00000446295 882 ntBASIC16.33■□□□□ 0.2
SIMC1Q8NDZ2 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.33■□□□□ 0.2
SIMC1Q8NDZ2 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.33■□□□□ 0.2
SIMC1Q8NDZ2 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.33■□□□□ 0.2
SIMC1Q8NDZ2 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.33■□□□□ 0.2
SIMC1Q8NDZ2 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.33■□□□□ 0.2
SIMC1Q8NDZ2 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.33■□□□□ 0.2
SIMC1Q8NDZ2 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SIMC1Q8NDZ2 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SIMC1Q8NDZ2 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.33■□□□□ 0.2
SIMC1Q8NDZ2 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.33■□□□□ 0.2
SIMC1Q8NDZ2 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.33■□□□□ 0.2
SIMC1Q8NDZ2 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SIMC1Q8NDZ2 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.33■□□□□ 0.2
SIMC1Q8NDZ2 PKD1P1-201ENST00000458669 6805 ntBASIC16.33■□□□□ 0.2
SIMC1Q8NDZ2 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.2
SIMC1Q8NDZ2 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SIMC1Q8NDZ2 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.33■□□□□ 0.2
SIMC1Q8NDZ2 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
SIMC1Q8NDZ2 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
SIMC1Q8NDZ2 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SIMC1Q8NDZ2 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
SIMC1Q8NDZ2 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SIMC1Q8NDZ2 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
SIMC1Q8NDZ2 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.33■□□□□ 0.2
SIMC1Q8NDZ2 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SIMC1Q8NDZ2 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.32■□□□□ 0.2
SIMC1Q8NDZ2 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.32■□□□□ 0.2
SIMC1Q8NDZ2 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SIMC1Q8NDZ2 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SIMC1Q8NDZ2 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SIMC1Q8NDZ2 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SIMC1Q8NDZ2 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SIMC1Q8NDZ2 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SIMC1Q8NDZ2 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SIMC1Q8NDZ2 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SIMC1Q8NDZ2 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.32■□□□□ 0.2
SIMC1Q8NDZ2 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SIMC1Q8NDZ2 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
SIMC1Q8NDZ2 TSPY19P-201ENST00000418461 509 ntBASIC16.32■□□□□ 0.2
SIMC1Q8NDZ2 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SIMC1Q8NDZ2 TSPY18P-201ENST00000441642 509 ntBASIC16.32■□□□□ 0.2
SIMC1Q8NDZ2 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.32■□□□□ 0.2
SIMC1Q8NDZ2 AC132008.2-207ENST00000454517 770 ntBASIC16.32■□□□□ 0.2
SIMC1Q8NDZ2 KRT18P31-201ENST00000506277 1292 ntBASIC16.32■□□□□ 0.2
SIMC1Q8NDZ2 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.32■□□□□ 0.2
SIMC1Q8NDZ2 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
SIMC1Q8NDZ2 PRELID1P1-202ENST00000567272 903 ntBASIC16.32■□□□□ 0.2
SIMC1Q8NDZ2 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SIMC1Q8NDZ2 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.32■□□□□ 0.2
SIMC1Q8NDZ2 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
SIMC1Q8NDZ2 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.32■□□□□ 0.2
SIMC1Q8NDZ2 AL591684.3-201ENST00000605187 298 ntBASIC16.32■□□□□ 0.2
SIMC1Q8NDZ2 AP001269.4-201ENST00000609611 512 ntBASIC16.32■□□□□ 0.2
SIMC1Q8NDZ2 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SIMC1Q8NDZ2 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
SIMC1Q8NDZ2 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SIMC1Q8NDZ2 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SIMC1Q8NDZ2 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SIMC1Q8NDZ2 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SIMC1Q8NDZ2 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SIMC1Q8NDZ2 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms